Probe CUST_1368_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_1368_PI426222305 JHI_St_60k_v1 DMT400052105 GAGCTAGCTAGGTAGCTAGTATATTGAAATAATTGGACAGGGTTAGGTTGCAACTAAAGT

All Microarray Probes Designed to Gene DMG400020225

Probe IDChip nameTranscript IDProbe Sequence
CUST_1368_PI426222305 JHI_St_60k_v1 DMT400052105 GAGCTAGCTAGGTAGCTAGTATATTGAAATAATTGGACAGGGTTAGGTTGCAACTAAAGT


Microarray Signals from CUST_1368_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h7.543693.723821.03610.530951
ABA 1h170.85536.406625.68894.39197
ACC 1h8.207764.003611.064580.549263
BABA 1h6.614933.838940.9607810.55752
Chitin 1h6.551923.714341.019640.576414
Epi 1h6.188643.587391.000160.579161
SA 1h6.30023.648460.858750.497299
Me-JA 1h6.45153.7431.104450.639569
Control 6h8.564173.742061.12710.552327
ABA 6h257.47756.96232.01846.49952
ACC 6h9.303074.614821.103010.555039
BABA 6h13.12486.208371.334410.659352
Chitin 6h84.726677.61053.0238512.3402
Epi 6h10.91084.544941.279260.610051
SA 6h10.70594.06831.348440.712241
Me-JA 6h16.05067.435071.852270.73161

Source Transcript PGSC0003DMT400052105 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g093890.1 +3 3e-147 437 246/285 (86%) evidence_code:10F0H1E0IEG genomic_reference:SL2.50ch02 gene_region:49173963-49174790 transcript_region:SL2.50ch02:49173963..49174790- functional_description:Unknown Protein (AHRD V1)
TAIR PP10 AT3G27250.1 +3 9e-42 155 114/287 (40%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40800.1); Has 104 Blast hits to 104 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10061633-10062481 FORWARD LENGTH=282

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052105

Click here to view details at Spud DB Genome Browser (opens in new window)