Probe CUST_1271_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1271_PI426222305 | JHI_St_60k_v1 | DMT400001379 | AAAGTGACGACAAGATCAGCGTATTTCTTGAATCGCCAAATGAACGATAGTATACAGATG |
All Microarray Probes Designed to Gene DMG400000514
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1271_PI426222305 | JHI_St_60k_v1 | DMT400001379 | AAAGTGACGACAAGATCAGCGTATTTCTTGAATCGCCAAATGAACGATAGTATACAGATG |
CUST_1103_PI426222305 | JHI_St_60k_v1 | DMT400001381 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
CUST_1110_PI426222305 | JHI_St_60k_v1 | DMT400001380 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
Microarray Signals from CUST_1271_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 99.033 | 14.3925 | 0.886773 | 0.0683954 |
ABA 1h | 89.1555 | 20.0326 | 0.873966 | 0.145056 |
ACC 1h | 111.22 | 28.3514 | 0.916245 | 0.200518 |
BABA 1h | 108.759 | 23.7902 | 0.983357 | 0.140698 |
Chitin 1h | 82.9036 | 15.1942 | 0.814964 | 0.0851898 |
Epi 1h | 77.5753 | 5.42354 | 0.815959 | 0.0573065 |
SA 1h | 109.099 | 24.5072 | 0.912036 | 0.193522 |
Me-JA 1h | 65.4641 | 12.9163 | 0.706561 | 0.075601 |
Control 6h | 219.768 | 91.1851 | 1.59241 | 0.799452 |
ABA 6h | 108.621 | 15.6459 | 0.915976 | 0.0793928 |
ACC 6h | 152.687 | 24.1919 | 1.18282 | 0.132528 |
BABA 6h | 172.515 | 28.9704 | 1.36366 | 0.209221 |
Chitin 6h | 154.835 | 13.2153 | 1.31985 | 0.100107 |
Epi 6h | 177.867 | 60.4449 | 1.29142 | 0.419215 |
SA 6h | 170.179 | 24.1686 | 1.53987 | 0.0946763 |
Me-JA 6h | 177.592 | 47.5196 | 1.49553 | 0.34528 |
Source Transcript PGSC0003DMT400001379 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc02g086550.2 | +1 | 0.0 | 721 | 352/379 (93%) | genomic_reference:SL2.50ch02 gene_region:43791778-43797970 transcript_region:SL2.50ch02:43791778..43797970- go_terms:GO:0005515 functional_description:Os06g0661900 protein (Fragment) (AHRD V1 ***- Q0DAD0_ORYSJ); contains Interpro domain(s) IPR004949 Protein of unknown function DUF266, plant |
TAIR PP10 | AT5G14550.1 | +1 | 2e-177 | 504 | 246/380 (65%) | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:4691321-4693732 REVERSE LENGTH=377 |