Probe CUST_12519_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_12519_PI426222305 | JHI_St_60k_v1 | DMT400063741 | ACTCATTGGAACTGGAAAGCTATTCCAGAATCAAGGTTCTCAAAAGTGGCTGAGCTGAAA |
All Microarray Probes Designed to Gene DMG400024771
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_12497_PI426222305 | JHI_St_60k_v1 | DMT400063742 | GAAGAATTGTCCCTTTTATATGGGGAAGAACCAGATCATTGGACTTGGAAATCTGTGCCA |
| CUST_12543_PI426222305 | JHI_St_60k_v1 | DMT400063744 | AACCAACTCATTGGAACTGGAAAGCTATTCCAGAATCAAGGTTTGCCGAGGTAGCTGAAC |
| CUST_12289_PI426222305 | JHI_St_60k_v1 | DMT400063743 | GACTTGTAAATGCGAATTTTTAATACTAATCGCTTTCCAGGTTTGCCGAGGTAGCTGAAC |
| CUST_12519_PI426222305 | JHI_St_60k_v1 | DMT400063741 | ACTCATTGGAACTGGAAAGCTATTCCAGAATCAAGGTTCTCAAAAGTGGCTGAGCTGAAA |
Microarray Signals from CUST_12519_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 9.5402 | 3.57945 | 0.423573 | 0.18004 |
| ABA 1h | 6.02242 | 3.42431 | 0.318593 | 0.181074 |
| ACC 1h | 16.422 | 4.56952 | 0.715908 | 0.24585 |
| BABA 1h | 18.7971 | 3.90978 | 0.869381 | 0.204044 |
| Chitin 1h | 17.0818 | 3.65935 | 0.857164 | 0.204207 |
| Epi 1h | 9.53779 | 3.48936 | 0.484018 | 0.200904 |
| SA 1h | 17.745 | 6.0792 | 0.680854 | 0.306735 |
| Me-JA 1h | 15.8381 | 3.78288 | 0.909273 | 0.216607 |
| Control 6h | 58.6424 | 22.1167 | 2.29769 | 0.88903 |
| ABA 6h | 58.2412 | 15.164 | 2.39606 | 0.520635 |
| ACC 6h | 50.0584 | 5.34541 | 2.03396 | 0.213049 |
| BABA 6h | 54.308 | 6.23904 | 2.24697 | 0.214273 |
| Chitin 6h | 37.2023 | 4.45422 | 1.63041 | 0.198062 |
| Epi 6h | 54.4873 | 11.2512 | 2.1742 | 0.531686 |
| SA 6h | 25.3418 | 6.03039 | 1.11935 | 0.229164 |
| Me-JA 6h | 14.4417 | 3.90158 | 0.61908 | 0.202977 |
Source Transcript PGSC0003DMT400063741 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G09155.1 | +3 | 2e-67 | 217 | 121/278 (44%) | phloem protein 2-B15 | chr1:2949831-2950842 REVERSE LENGTH=289 |