Probe CUST_1202_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1202_PI426222305 | JHI_St_60k_v1 | DMT400003712 | TGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCTATTCAAG |
All Microarray Probes Designed to Gene DMG400001460
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1202_PI426222305 | JHI_St_60k_v1 | DMT400003712 | TGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCTATTCAAG |
Microarray Signals from CUST_1202_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 207.146 | 15.9794 | 0.791802 | 0.0475251 |
| ABA 1h | 2076.7 | 327.797 | 8.78458 | 0.934925 |
| ACC 1h | 341.919 | 80.0561 | 1.19572 | 0.245448 |
| BABA 1h | 312.452 | 102.307 | 1.09048 | 0.332256 |
| Chitin 1h | 325.392 | 46.6877 | 1.36538 | 0.224033 |
| Epi 1h | 267.586 | 29.9584 | 1.17363 | 0.140875 |
| SA 1h | 296.87 | 50.1006 | 1.07664 | 0.134835 |
| Me-JA 1h | 559.02 | 118.671 | 2.50742 | 0.358171 |
| Control 6h | 183.377 | 76.796 | 0.596996 | 0.229186 |
| ABA 6h | 1352.45 | 160.129 | 4.81987 | 0.470228 |
| ACC 6h | 196.763 | 36.3938 | 0.638127 | 0.0393248 |
| BABA 6h | 156.916 | 33.5064 | 0.510704 | 0.109863 |
| Chitin 6h | 146.478 | 21.0866 | 0.518824 | 0.0626025 |
| Epi 6h | 129.159 | 35.1287 | 0.410829 | 0.102763 |
| SA 6h | 209.531 | 19.1139 | 0.808252 | 0.104233 |
| Me-JA 6h | 431.809 | 52.7579 | 1.64077 | 0.122612 |
Source Transcript PGSC0003DMT400003712 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g088910.2 | +2 | 5e-171 | 490 | 296/321 (92%) | genomic_reference:SL2.50ch02 gene_region:45411058-45413952 transcript_region:SL2.50ch02:45411058..45413952- go_terms:GO:0005515 functional_description:Ninja-family protein 3 (AHRD V1 ***- NNJA3_WHEAT); contains Interpro domain(s) IPR012463 Protein of unknown function DUF1675 |
| TAIR PP10 | AT3G29575.1 | +2 | 2e-54 | 186 | 117/260 (45%) | ABI five binding protein 3 | chr3:11382416-11383657 REVERSE LENGTH=231 |