Probe CUST_11866_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11866_PI426222305 | JHI_St_60k_v1 | DMT400046765 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
All Microarray Probes Designed to Gene DMG400018158
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11814_PI426222305 | JHI_St_60k_v1 | DMT400046768 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11721_PI426222305 | JHI_St_60k_v1 | DMT400046767 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11866_PI426222305 | JHI_St_60k_v1 | DMT400046765 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11742_PI426222305 | JHI_St_60k_v1 | DMT400046766 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11831_PI426222305 | JHI_St_60k_v1 | DMT400046769 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
Microarray Signals from CUST_11866_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 2915.5 | 356.017 | 1.38183 | 0.0797932 |
| ABA 1h | 1941.8 | 112.148 | 1.05533 | 0.0734005 |
| ACC 1h | 2244.35 | 176.64 | 1.04384 | 0.0602897 |
| BABA 1h | 1662.9 | 373.215 | 0.782885 | 0.118552 |
| Chitin 1h | 1465.26 | 192.322 | 0.770008 | 0.0910752 |
| Epi 1h | 1594.11 | 184.326 | 0.872585 | 0.0941028 |
| SA 1h | 1884.05 | 117.318 | 0.878177 | 0.0507211 |
| Me-JA 1h | 1066.64 | 61.8117 | 0.6265 | 0.0362144 |
| Control 6h | 3256.02 | 639.549 | 1.49973 | 0.205965 |
| ABA 6h | 1893.72 | 109.725 | 0.853534 | 0.0659179 |
| ACC 6h | 2576.93 | 376.889 | 1.05418 | 0.123142 |
| BABA 6h | 2591.13 | 150.078 | 1.10967 | 0.070893 |
| Chitin 6h | 2753.88 | 171.954 | 1.23876 | 0.0715363 |
| Epi 6h | 3055.8 | 234.643 | 1.29506 | 0.0747853 |
| SA 6h | 2621.39 | 597.874 | 1.19911 | 0.172614 |
| Me-JA 6h | 1647.52 | 507.726 | 0.725426 | 0.164838 |
Source Transcript PGSC0003DMT400046765 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G48200.1 | +1 | 7e-119 | 382 | 217/365 (59%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:17832949-17837371 REVERSE LENGTH=1088 |