Probe CUST_11742_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11742_PI426222305 | JHI_St_60k_v1 | DMT400046766 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
All Microarray Probes Designed to Gene DMG400018158
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11814_PI426222305 | JHI_St_60k_v1 | DMT400046768 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11721_PI426222305 | JHI_St_60k_v1 | DMT400046767 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11866_PI426222305 | JHI_St_60k_v1 | DMT400046765 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11742_PI426222305 | JHI_St_60k_v1 | DMT400046766 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11831_PI426222305 | JHI_St_60k_v1 | DMT400046769 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
Microarray Signals from CUST_11742_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 2906.97 | 257.149 | 1.43753 | 0.0830093 |
| ABA 1h | 1961.16 | 113.424 | 1.103 | 0.113207 |
| ACC 1h | 2068.65 | 216.834 | 0.991672 | 0.0572842 |
| BABA 1h | 1759.46 | 314.857 | 0.876925 | 0.0837341 |
| Chitin 1h | 1556.06 | 123.087 | 0.856883 | 0.0796382 |
| Epi 1h | 1592.85 | 192.337 | 0.902183 | 0.105744 |
| SA 1h | 1890.2 | 134.437 | 0.911847 | 0.0526664 |
| Me-JA 1h | 1082.76 | 77.5514 | 0.657176 | 0.0379887 |
| Control 6h | 3127.63 | 603.217 | 1.49667 | 0.203331 |
| ABA 6h | 1873.16 | 108.428 | 0.875798 | 0.0588909 |
| ACC 6h | 2501.47 | 316.897 | 1.06713 | 0.119652 |
| BABA 6h | 2514.12 | 145.632 | 1.1156 | 0.0805498 |
| Chitin 6h | 2768.01 | 238.74 | 1.28519 | 0.0850145 |
| Epi 6h | 3012.59 | 213.241 | 1.32426 | 0.0764728 |
| SA 6h | 2481.91 | 613.466 | 1.15951 | 0.202499 |
| Me-JA 6h | 1542.91 | 390.259 | 0.725622 | 0.122408 |
Source Transcript PGSC0003DMT400046766 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G48200.1 | +1 | 6e-140 | 438 | 279/474 (59%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:17832949-17837371 REVERSE LENGTH=1088 |