Probe CUST_11721_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11721_PI426222305 | JHI_St_60k_v1 | DMT400046767 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
All Microarray Probes Designed to Gene DMG400018158
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11814_PI426222305 | JHI_St_60k_v1 | DMT400046768 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11721_PI426222305 | JHI_St_60k_v1 | DMT400046767 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11866_PI426222305 | JHI_St_60k_v1 | DMT400046765 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11742_PI426222305 | JHI_St_60k_v1 | DMT400046766 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
| CUST_11831_PI426222305 | JHI_St_60k_v1 | DMT400046769 | CCACTGCTTGACTGGTATCTGTTCTTATGTTTTTAGGAGGTTCATGTTATATTTCCATAA |
Microarray Signals from CUST_11721_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 2792.4 | 272.957 | 1.49699 | 0.0864468 |
| ABA 1h | 1768.43 | 102.314 | 1.07968 | 0.0967104 |
| ACC 1h | 1858.72 | 312.901 | 0.949823 | 0.097247 |
| BABA 1h | 1580.97 | 264.922 | 0.860654 | 0.07223 |
| Chitin 1h | 1337.86 | 135.818 | 0.797023 | 0.0941943 |
| Epi 1h | 1461.92 | 164.955 | 0.9025 | 0.10343 |
| SA 1h | 1721.81 | 99.7688 | 0.903953 | 0.0553986 |
| Me-JA 1h | 1030.2 | 59.6388 | 0.681884 | 0.0506435 |
| Control 6h | 2875.82 | 662.198 | 1.46995 | 0.256043 |
| ABA 6h | 1684.81 | 97.3544 | 0.857104 | 0.0495159 |
| ACC 6h | 2296.13 | 240.132 | 1.07074 | 0.0662643 |
| BABA 6h | 2265.7 | 139.327 | 1.09094 | 0.0754619 |
| Chitin 6h | 2317.76 | 134.199 | 1.175 | 0.0678649 |
| Epi 6h | 2797.82 | 192.432 | 1.33624 | 0.135919 |
| SA 6h | 2132.16 | 408.404 | 1.12027 | 0.111042 |
| Me-JA 6h | 1474.92 | 365.792 | 0.751696 | 0.130637 |
Source Transcript PGSC0003DMT400046767 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G48200.1 | +2 | 6e-173 | 552 | 338/592 (57%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:17832949-17837371 REVERSE LENGTH=1088 |