Probe CUST_11373_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11373_PI426222305 | JHI_St_60k_v1 | DMT400010663 | TTGGTAGCCTCTTTGCCAAGAAATAATGATCAGAGACGGATTTAGAATTTTAAGTCCATC |
All Microarray Probes Designed to Gene DMG400004165
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11373_PI426222305 | JHI_St_60k_v1 | DMT400010663 | TTGGTAGCCTCTTTGCCAAGAAATAATGATCAGAGACGGATTTAGAATTTTAAGTCCATC |
Microarray Signals from CUST_11373_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 2193.07 | 355.016 | 1.27007 | 0.125967 |
| ABA 1h | 1405.38 | 208.918 | 0.921432 | 0.180946 |
| ACC 1h | 1980.78 | 168.424 | 1.1365 | 0.0908852 |
| BABA 1h | 1508.14 | 256.165 | 0.897511 | 0.0756332 |
| Chitin 1h | 1500.86 | 109.846 | 0.98521 | 0.117225 |
| Epi 1h | 1494.18 | 96.7838 | 1.02003 | 0.0589292 |
| SA 1h | 1944.33 | 216.728 | 1.10887 | 0.115844 |
| Me-JA 1h | 1268.09 | 92.5459 | 0.916653 | 0.0529736 |
| Control 6h | 2171.86 | 466.588 | 1.22872 | 0.166443 |
| ABA 6h | 431.086 | 58.427 | 0.236134 | 0.0407344 |
| ACC 6h | 1886.57 | 380.244 | 0.938626 | 0.059868 |
| BABA 6h | 2382.23 | 211.181 | 1.25291 | 0.131771 |
| Chitin 6h | 2326.94 | 277.519 | 1.27676 | 0.133047 |
| Epi 6h | 2196.51 | 336.164 | 1.12529 | 0.27873 |
| SA 6h | 1454 | 229.647 | 0.848768 | 0.0569184 |
| Me-JA 6h | 750.756 | 166.998 | 0.421956 | 0.072143 |
Source Transcript PGSC0003DMT400010663 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G47070.1 | +3 | 7e-16 | 71 | 41/83 (49%) | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:17337205-17337507 REVERSE LENGTH=100 |