Probe CUST_1110_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1110_PI426222305 | JHI_St_60k_v1 | DMT400001380 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
All Microarray Probes Designed to Gene DMG400000514
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1271_PI426222305 | JHI_St_60k_v1 | DMT400001379 | AAAGTGACGACAAGATCAGCGTATTTCTTGAATCGCCAAATGAACGATAGTATACAGATG |
CUST_1103_PI426222305 | JHI_St_60k_v1 | DMT400001381 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
CUST_1110_PI426222305 | JHI_St_60k_v1 | DMT400001380 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
Microarray Signals from CUST_1110_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 34.6996 | 7.51777 | 1.02354 | 0.1501 |
ABA 1h | 26.0362 | 7.11049 | 0.825631 | 0.243778 |
ACC 1h | 28.6311 | 4.28196 | 0.842327 | 0.133018 |
BABA 1h | 25.634 | 4.14187 | 0.807843 | 0.134099 |
Chitin 1h | 15.5285 | 3.79376 | 0.530179 | 0.131467 |
Epi 1h | 12.3313 | 3.62804 | 0.43714 | 0.130607 |
SA 1h | 39.5336 | 4.50558 | 1.16835 | 0.12704 |
Me-JA 1h | 14.2672 | 5.04988 | 0.469973 | 0.175058 |
Control 6h | 67.5005 | 21.9983 | 1.86958 | 0.51799 |
ABA 6h | 41.1146 | 16.2296 | 1.01229 | 0.390247 |
ACC 6h | 58.3031 | 9.0028 | 1.5226 | 0.195675 |
BABA 6h | 57.8374 | 10.9925 | 1.5238 | 0.275413 |
Chitin 6h | 72.0227 | 12.4086 | 2.02443 | 0.392056 |
Epi 6h | 53.6185 | 11.906 | 1.39183 | 0.391715 |
SA 6h | 49.5696 | 13.9954 | 1.38057 | 0.702341 |
Me-JA 6h | 66.2559 | 28.5879 | 1.62742 | 0.787973 |
Source Transcript PGSC0003DMT400001380 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc02g086550.2 | +3 | 3e-180 | 520 | 246/259 (95%) | genomic_reference:SL2.50ch02 gene_region:43791778-43797970 transcript_region:SL2.50ch02:43791778..43797970- go_terms:GO:0005515 functional_description:Os06g0661900 protein (Fragment) (AHRD V1 ***- Q0DAD0_ORYSJ); contains Interpro domain(s) IPR004949 Protein of unknown function DUF266, plant |
TAIR PP10 | AT5G14550.1 | +3 | 7e-130 | 390 | 183/276 (66%) | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:4691321-4693732 REVERSE LENGTH=377 |