Probe CUST_1110_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_1110_PI426222305 JHI_St_60k_v1 DMT400001380 GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA

All Microarray Probes Designed to Gene DMG400000514

Probe IDChip nameTranscript IDProbe Sequence
CUST_1271_PI426222305 JHI_St_60k_v1 DMT400001379 AAAGTGACGACAAGATCAGCGTATTTCTTGAATCGCCAAATGAACGATAGTATACAGATG
CUST_1103_PI426222305 JHI_St_60k_v1 DMT400001381 GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA
CUST_1110_PI426222305 JHI_St_60k_v1 DMT400001380 GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA


Microarray Signals from CUST_1110_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h34.69967.517771.023540.1501
ABA 1h26.03627.110490.8256310.243778
ACC 1h28.63114.281960.8423270.133018
BABA 1h25.6344.141870.8078430.134099
Chitin 1h15.52853.793760.5301790.131467
Epi 1h12.33133.628040.437140.130607
SA 1h39.53364.505581.168350.12704
Me-JA 1h14.26725.049880.4699730.175058
Control 6h67.500521.99831.869580.51799
ABA 6h41.114616.22961.012290.390247
ACC 6h58.30319.00281.52260.195675
BABA 6h57.837410.99251.52380.275413
Chitin 6h72.022712.40862.024430.392056
Epi 6h53.618511.9061.391830.391715
SA 6h49.569613.99541.380570.702341
Me-JA 6h66.255928.58791.627420.787973

Source Transcript PGSC0003DMT400001380 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g086550.2 +3 3e-180 520 246/259 (95%) genomic_reference:SL2.50ch02 gene_region:43791778-43797970 transcript_region:SL2.50ch02:43791778..43797970- go_terms:GO:0005515 functional_description:Os06g0661900 protein (Fragment) (AHRD V1 ***- Q0DAD0_ORYSJ); contains Interpro domain(s) IPR004949 Protein of unknown function DUF266, plant
TAIR PP10 AT5G14550.1 +3 7e-130 390 183/276 (66%) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:4691321-4693732 REVERSE LENGTH=377

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001380

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