Probe CUST_1106_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_1106_PI426222305 JHI_St_60k_v1 DMT400032816 GCCTTGATGTGGCTATAAAGCTAGGTATTGCTGGATGTGATGTTTTAAAATTTTCAATTG

All Microarray Probes Designed to Gene DMG400012603

Probe IDChip nameTranscript IDProbe Sequence
CUST_782_PI426222305 JHI_St_60k_v1 DMT400032814 AAGACCCCCGGAGTTGATGTGAAGCCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGA
CUST_1153_PI426222305 JHI_St_60k_v1 DMT400032815 AACTGACTGGTGTAATGTTCTAAAATTTTGTTTGCTGAGGCCAATGGAGTTGAATATAAC
CUST_1106_PI426222305 JHI_St_60k_v1 DMT400032816 GCCTTGATGTGGCTATAAAGCTAGGTATTGCTGGATGTGATGTTTTAAAATTTTCAATTG


Microarray Signals from CUST_1106_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h397.02249.25870.983790.0914185
ABA 1h380.52431.72741.074010.0628221
ACC 1h502.37999.53031.175770.168577
BABA 1h362.99366.59220.9124880.0922696
Chitin 1h277.10936.39260.760350.0595146
Epi 1h337.38640.37490.9651580.113389
SA 1h325.59842.23930.7823540.0702201
Me-JA 1h159.92418.79910.4857340.0298191
Control 6h419.539133.4860.9050160.324389
ABA 6h902.31991.51262.111330.123613
ACC 6h558.87884.24161.198550.0906918
BABA 6h753.563136.4681.642830.23939
Chitin 6h454.27740.52071.065120.0910641
Epi 6h456.16279.55820.9881240.152001
SA 6h308.98969.9340.7498960.145036
Me-JA 6h343.00166.9360.8276610.120864

Source Transcript PGSC0003DMT400032816 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g093360.2 +1 0.0 1127 608/632 (96%) genomic_reference:SL2.50ch02 gene_region:48831308-48835273 transcript_region:SL2.50ch02:48831308..48835273+ go_terms:GO:0004711 functional_description:Ribosomal protein S6 kinase alpha-3 (AHRD V1 *-** KS6A3_HUMAN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
TAIR PP10 AT3G27580.1 +1 0.0 639 370/599 (62%) Protein kinase superfamily protein | chr3:10217671-10219484 REVERSE LENGTH=578

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400032816

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