Probe CUST_1106_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_1106_PI426222305 | JHI_St_60k_v1 | DMT400032816 | GCCTTGATGTGGCTATAAAGCTAGGTATTGCTGGATGTGATGTTTTAAAATTTTCAATTG |
All Microarray Probes Designed to Gene DMG400012603
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_782_PI426222305 | JHI_St_60k_v1 | DMT400032814 | AAGACCCCCGGAGTTGATGTGAAGCCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGA |
CUST_1153_PI426222305 | JHI_St_60k_v1 | DMT400032815 | AACTGACTGGTGTAATGTTCTAAAATTTTGTTTGCTGAGGCCAATGGAGTTGAATATAAC |
CUST_1106_PI426222305 | JHI_St_60k_v1 | DMT400032816 | GCCTTGATGTGGCTATAAAGCTAGGTATTGCTGGATGTGATGTTTTAAAATTTTCAATTG |
Microarray Signals from CUST_1106_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 397.022 | 49.2587 | 0.98379 | 0.0914185 |
ABA 1h | 380.524 | 31.7274 | 1.07401 | 0.0628221 |
ACC 1h | 502.379 | 99.5303 | 1.17577 | 0.168577 |
BABA 1h | 362.993 | 66.5922 | 0.912488 | 0.0922696 |
Chitin 1h | 277.109 | 36.3926 | 0.76035 | 0.0595146 |
Epi 1h | 337.386 | 40.3749 | 0.965158 | 0.113389 |
SA 1h | 325.598 | 42.2393 | 0.782354 | 0.0702201 |
Me-JA 1h | 159.924 | 18.7991 | 0.485734 | 0.0298191 |
Control 6h | 419.539 | 133.486 | 0.905016 | 0.324389 |
ABA 6h | 902.319 | 91.5126 | 2.11133 | 0.123613 |
ACC 6h | 558.878 | 84.2416 | 1.19855 | 0.0906918 |
BABA 6h | 753.563 | 136.468 | 1.64283 | 0.23939 |
Chitin 6h | 454.277 | 40.5207 | 1.06512 | 0.0910641 |
Epi 6h | 456.162 | 79.5582 | 0.988124 | 0.152001 |
SA 6h | 308.989 | 69.934 | 0.749896 | 0.145036 |
Me-JA 6h | 343.001 | 66.936 | 0.827661 | 0.120864 |
Source Transcript PGSC0003DMT400032816 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | Solyc02g093360.2 | +1 | 0.0 | 1127 | 608/632 (96%) | genomic_reference:SL2.50ch02 gene_region:48831308-48835273 transcript_region:SL2.50ch02:48831308..48835273+ go_terms:GO:0004711 functional_description:Ribosomal protein S6 kinase alpha-3 (AHRD V1 *-** KS6A3_HUMAN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase |
TAIR PP10 | AT3G27580.1 | +1 | 0.0 | 639 | 370/599 (62%) | Protein kinase superfamily protein | chr3:10217671-10219484 REVERSE LENGTH=578 |