Probe CUST_1103_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1103_PI426222305 | JHI_St_60k_v1 | DMT400001381 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
All Microarray Probes Designed to Gene DMG400000514
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1271_PI426222305 | JHI_St_60k_v1 | DMT400001379 | AAAGTGACGACAAGATCAGCGTATTTCTTGAATCGCCAAATGAACGATAGTATACAGATG |
| CUST_1103_PI426222305 | JHI_St_60k_v1 | DMT400001381 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
| CUST_1110_PI426222305 | JHI_St_60k_v1 | DMT400001380 | GCTTTAGAGATCTTGATGGGTAAGTGATTATACTCTACAAATTTGAAGTGTGTGGGAATA |
Microarray Signals from CUST_1103_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 22.4068 | 8.09345 | 0.599834 | 0.175416 |
| ABA 1h | 25.2264 | 6.77462 | 0.794491 | 0.176822 |
| ACC 1h | 17.2397 | 4.28751 | 0.472173 | 0.147054 |
| BABA 1h | 28.4667 | 4.85494 | 0.864682 | 0.245095 |
| Chitin 1h | 16.6287 | 6.44904 | 0.485888 | 0.200982 |
| Epi 1h | 19.0143 | 3.76739 | 0.638509 | 0.143343 |
| SA 1h | 37.4757 | 8.15453 | 1.05169 | 0.239995 |
| Me-JA 1h | 19.5903 | 7.20079 | 0.608279 | 0.293455 |
| Control 6h | 66.2243 | 18.8073 | 1.79295 | 0.478965 |
| ABA 6h | 103.405 | 69.6629 | 1.76733 | 1.74903 |
| ACC 6h | 54.8779 | 5.66536 | 1.43657 | 0.145684 |
| BABA 6h | 57.2526 | 17.475 | 1.34678 | 0.537526 |
| Chitin 6h | 43.7125 | 9.28012 | 1.17185 | 0.289034 |
| Epi 6h | 45.4641 | 13.5799 | 1.0844 | 0.504385 |
| SA 6h | 36.2383 | 11.8735 | 0.93436 | 0.608046 |
| Me-JA 6h | 59.8516 | 19.8747 | 1.57116 | 0.533624 |
Source Transcript PGSC0003DMT400001381 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g086550.2 | +1 | 0.0 | 754 | 363/375 (97%) | genomic_reference:SL2.50ch02 gene_region:43791778-43797970 transcript_region:SL2.50ch02:43791778..43797970- go_terms:GO:0005515 functional_description:Os06g0661900 protein (Fragment) (AHRD V1 ***- Q0DAD0_ORYSJ); contains Interpro domain(s) IPR004949 Protein of unknown function DUF266, plant |
| TAIR PP10 | AT5G14550.1 | +1 | 7e-179 | 516 | 247/367 (67%) | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:4691321-4693732 REVERSE LENGTH=377 |