Microarray Probes on PGSC0003DMT400097765
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9561_PI426222305 |
JHI_St_60k_v1 |
TTTGAATCCTTGCAGTCCCAGAAATGTAGATGTAGAACAAGGAAGCAGGGGACAGAGCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400097765
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400097765 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G53820.1 |
+1 |
9e-39 |
139 |
68/129 (53%) |
RING/U-box superfamily protein | chr1:20091491-20092423 FORWARD LENGTH=310 |
Transcript Sequence (786 bp)
>PGSC0003DMT400097765 786 pgsc_dm_v3.4
ATGGGAAGTGGTAAATTAGGTGATTCAGGTATGATTGCGATCACGGCTAAGATCATGATG
GCTGTCGTCGTATTTCTCTTCTTTGCGGTGGTCTTGGTATTTTTCCTTCACATATACGCC
AAATTTTTCACGAGAGAGGACGCCAACCCGAACGACGGCACAAGGCGTCGCCGCCGTCGC
CGGTTCGACTTTGCTGGCGGTTATCAAGAAGTGAATGCACTCCGGAGAGGCCTTGACCCT
TCCATCCTTAAAACCATACCCGTAATTCCATTTAATACCAAGGATTTCAAAGATGGATTG
GAATGCTCCGTTTGTCTTACTGACGTTTCTGATGGTGAAAAGGCGAGACTTTTGCCTAAA
TGCAATCATGGGTTTCATGTCGATTGCATTGATATGTGGTTTCAATCTCATTCCACTTGT
CCTTTATGCCGAAACCCTGTTTCAGAAATGTCCTCTACGAAATCCACCATTGTAGAATCA
AATTCCGGGGCCATTAGGGAACCAGTAGAAGAAGGCTCAGTAGCTTCCACAGAGACACGA
AATTTACCAACTAATGTTCTGTTCTGGGGAGATGAAACTACTACATCATCAGCATCCACA
AGTACTAGTAGGCCAGATGGGGTTTTGATGATTGATATTCCAAGACAGAATACTGAAGAG
GCAGAAAAAGAACAGAAAACACCAACACCGACACGATTGAGATCTTTAACGAGGCTTTTT
AGCAGTTTGAATCCTTGCAGTCCCAGAAATGTAGATGTAGAACAAGGAAGCAGGGGACAG
AGCTAG
