Microarray Probes on PGSC0003DMT400097155
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42908_PI426222305 |
JHI_St_60k_v1 |
GTTGCTAGAGAATTGGTTAAGTTGGAAAGGAGTTACTCTCTTGAAATGAATTCCTTTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400097155
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400097155 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G18380.1 |
+1 |
3e-49 |
172 |
139/377 (37%) |
F-box family protein | chr4:10157957-10159099 FORWARD LENGTH=380 |
Transcript Sequence (1053 bp)
>PGSC0003DMT400097155 1053 pgsc_dm_v3.4
ATGTCAATTCATGAAGAAAATGAAGAAGATTTGTTTGATCGCTTACCAGATGCTATCCTC
TTAACAATCTTCGATAAACTTCAAGATGCGAAATCTCTTTCAATTTCTTCATCTCTCTGC
AAGCGTTTCCGCTTCCTCACAACCCAAACCCAGCACATTTCACTCGCAATCCCCTCACAA
AAATACCACAAACCATTGCCTTTTTCCAGTAGAAACAAATTTATTCGATTTTTTCTCAAT
CCTTTTCAGTTTGTTTATCGACAAATCAGTCAATGGAACCAGATTTGTATGCCCTGTGAT
AATACACAGAAAAAGAGTGATAGTTATAGTTGTTGTACTTGTTCTTCTTATGCTTCTTCT
TCTCCGGCTGAAATACTGAGAAATTTCACCGAAATCAAGGAACTCGAAATTCGAGTTCCC
AGTAATGGCGGTGGAGGTGATTCAGATTCGTTACTGAAATGGAAAGGTGAATTTGGTAGT
CAATTGAAAAATTGCTTGGTTGTTGGTGGAATATCACTTTCCCCAATTCGTAACGATCGA
ATTGACAATAGCGATGCTCCAATTAGGGAACTAGAGTTGCAACGGATGACGAATGAGGAT
TTGAAATTGCGAATTGTATGGATAATTTCGTCGTTAATAGCAGCATCAGCGCGGCATTGT
TTGTTAGAAGAAGTGATTAAGGAGAAGAAATTGCTGAATAAAGTAGTGATTATGGATGAT
ATTGGTCAAGGTAAAGTTTGTATGAATGGGGAAGAAGTAGAGGAAATGAGGAGAGATGCA
GAGGTTTTTTCGTCGAAAATGCCGGCGTTGAAGGTGAAAATGTGGTATTCGCCGGAGTTG
GAGTTGCCGGAGGGAGGATGTGTGATGAAGGGGGCGACGTTGGTGGTGATAAAGCCGGTG
GAGGAGTGGAGCAAGGCGGATGATGGCGGAGATTTGGTGGCGAAAGGGTTTGGTTTCGCC
GGAGATGGGAAAGAGGAGAAGGTGTTTGATGAAGTTGCTAGAGAATTGGTTAAGTTGGAA
AGGAGTTACTCTCTTGAAATGAATTCCTTTTGA
