Microarray Probes on PGSC0003DMT400095861
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30964_PI426222305 |
JHI_St_60k_v1 |
ACCTCATCTGGCTTGATCACTCCAGTTTTTATAGAGGATCAATTCATTAATGTATGGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400095861
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400095861 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G10560.1 |
+1 |
4e-139 |
423 |
235/553 (42%) |
plant U-box 18 | chr1:3484613-3486706 FORWARD LENGTH=697 |
Transcript Sequence (1683 bp)
>PGSC0003DMT400095861 1683 pgsc_dm_v3.4
ATGCTGGCAAGAGCTGTTGCTGTGGCACTTGATGTTCTTCCTTTGAAGGAAATGGATGTT
TCTGTGGAGGGTCAAGAAGTGGTTGAGTTTGTGAGGAATCAAGCTGTTAAGTTGAAGTTT
GAAGTGGAAATGGATGATGGGAGAATGCAAGTGAATGTTTTGAAGATTTTGGATCAACTT
GAAAATGAAGTTATTCCAGAAACGCGTGATCTGAAAAGGGTTCTTGATTCTTTAGGGATT
ACACGTTGGAGCGCGTGTAATAGAGAAGTTAAGTTCTTGGATAATGAGATGTTGTTGGAG
GGGAATACTGAGGAGAAGAGAGATATGGGAATCCTTAGTAGCTTAATGGGGTTCATGATA
TACTGCAGGGGAACTCTGTTTGAAGTATTGGATAATGGAGCAGGCAGACAAATCAATGGA
GGCAGTACTAATGCAGATCAAGTCATCAGGTTCTTGAATCTTGATGATTTCAGGTGTCCA
ATTACACTTGAAATCATGAGTGAGCCAGTGACAATAGCCTCAGGTCACACATATGATCGG
GCTTCGATTCTGAAATGGTTCAGAGCTGGAAACTCCACTTGTCCAAAGACTGGTGAGAGG
TTAACAAGTATTGATTTGGTTCCTAATTTTGCTTTGAAGGTTTTAATCAAGCAGTATTGC
TCCGCGAATGGTATTCCATTTGTGGAGACTGGTAGGCGAAATCGTGATGCTGGAAGATTT
GTTGGTTCAAGCAGTGTGGCTAATGAGCAGGCTATGAAGTTGCTTGCAAGTTTTCTAGTA
GGCAGGCTGGTTGGTGGAACAATGGAACAGCAAAATAAGGCTGCTTTCGAGATTCGTTTG
CTCACTAAAACAAGCATTTTTAACAGGTCTTGTTTGGTGGAAGCTGGTGTAATCCCACCT
CTTCTGAATCTTGTTACTTCAAGGGATTCTTCTTGTCAAGAGAATTCAATGGCTACTCTG
CTGAACCTCTCAAAGAACTCTAAATGCAAAAGCACAATTGTTGGAAATGGAGGTTTGTTC
TTGATACTTGATGTGTTGAAAGGAGGGCTAAAGATGGAAGCTCGACAGCACGCAGCTGGT
ACATTATTCTACCTTACATCAGTAGAAGAGTACCGTAAAATGATGGGAGAAAATCCAGAG
TTCATTCCATCACTTTTGGAGTTGCTAAGAAATGGCACTGACAGAGGAAAAAAGAATGCC
TTGGTCACCATTTTTGGCCTCCTAATGCGCCCCGAAAACCACTGGAGAGTGATTGCTGCT
GGATTAGTCCCCTTGGTGGTTAATCTGTTGAAATCTTTCGAAAGGGAAGATCTCATTACA
GATTCTTTAGCAGTTTTAACAACGCTTTCTGAAAGGCTAGACGGAGCAATGGCTGTTCTT
TATGCTGGAGCTTTGCCTATTATTGTCAATGTTCTAAGTTCTTGCAATTCAAGGGCATCA
AAAGAGTACTGTGTCTCATTGTTGCTGGCTTTGTGTATCAATGGTGGAGCAGATGCAGTT
CCTGTTTTAGTAAAGAACTCATCTCTCATGGGACCGTTATATTCCCTCCTGGCTGAAGGC
AACTCAAAAGCAAGCAAGAAAGCTAGTACACTCATCAGAATCTTGCACGAGTACAACGAG
AAGACCTCATCTGGCTTGATCACTCCAGTTTTTATAGAGGATCAATTCATTAATGTATGG
TAA
