Microarray Probes on PGSC0003DMT400094724
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17053_PI426222305 |
JHI_St_60k_v1 |
TTGTTAACACTGTTCCAGCGACTGAACTAAACCAAAGCAGTGGCTCAAAGGCAGTTGATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400094724
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400094724 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00650.1 |
+1 |
7e-29 |
119 |
72/171 (42%) |
FRIGIDA-like protein | chr4:269026-270363 FORWARD LENGTH=314 |
Transcript Sequence (2343 bp)
>PGSC0003DMT400094724 2343 pgsc_dm_v3.4
ATGGATACTTCCGCCACAGCGACGCCGGTGTCGCAGCCACCGTTGGCCACCCAATTGCAA
CCATCACATTCTCAGGTATCGATAACTGCCGACAATCTCCGCACGTTCTCCTATTCCCTC
ACCGCTTTCCAACAATGCTTCAATGATCTACAACGACACATTAATTCAATACAAACCTCA
ATCAACACTATGCTGCTACCCCCTCAACCTTTACCTGCCTCATCATCACCAGCAGTTGCA
ACCCCAGCCTCAGCCCCGGCCCCGGAGCCAGAACCATCTTGGGAATCTGACCCCTCTGAA
GACCTAGAAGAAGAAGAAGAAGTCCAGCAAGAGGAGAAGGAAGTGGAGGGAGGCGAGGGC
GAAGGTGAAGACGAAGGCGAGGAAGTGAATTCGCCTCACTTAGAACTGAAATTGCCTCGT
TCAGAACTGAAATCGCCTCGTTCAGAACTGAAATCTCCCCGTTCAGAGTTGGAAATCTTC
TGCGAAACGATGGACCATTGTGGTTTGCGGAAGTATATGACAACACATATTTCAAATTTT
CGTGGACTGCGTGAAGAAGTCCGTAAGGCATTGAGACTTTCGCCCAATCCTGCAACCCTT
GTATTTAATTGTATCGGTAAGTTTTATATTACAGCGGGCAAGAAGTTTGCTAATGAATCA
CCTTTGGGCCGGGGAAGGAAGGCTAAAGTATTACTTTTGGAATGCTTCTTGTTAATGATA
GGAATCTGTGACAAGGGAGTTGAGATTGAGAATTGGGTGAAGGAAGAGGCAGAGCAAACA
GCTTTAGCATGGTTGGAGAGGATGAAGTCTGAAGGAGGAAAGCTTCAAGAAATTGATGCC
CGAGGTTTGCTCTTCTTTATTGGGGGTTTCGGGATTCCAGATCAATTTACAAATGCGAAT
ATCAGAACTTTGCTTCAGGTAAGTAACCTTAAGTGGAGTTTTGATGCACTCAAAAGATCA
AACGCTCTCATGGCGAAGCTTCCAGAAATAATAGAGGAAATGGTGGCGAACAAGGCAGTA
ATTAAAGCTGTTCATATTGTCTATAGTGTTGGAATGCAGGACAAATTTAACCCTAGGACA
CTTTTAACAACATTTATAAGAGAGTCCAAAAAATTATTTGACAACATGAATGGATCACAA
AGTGCACATCAAGGGAATATTGTAGCAAAAGGGAAGTACTTAGGTGATCTGAGATCGATC
ATCAAATGTTTGAGAAATCACGAGGTTGATCCTTCAAAAGTTCTTCCCGGATGGGAAATC
AGCAAGAGAATAGCGAGTTTGGAGAAAGAAATTGCTGAATTCAATAAGCAGATACCTGAT
AAGAAGATAGCACATGGATCGCATAAGAGAAAAAAGGATGGAACTGTGTGGTTGAGCAAC
AAAGAAATGAAACACTCACATTCTTCAAATCCATGGCCGCCACAACATCAAAGAGTTGCT
AGTAATGTCATTAGCAATAACACCTTGTTTGAAGGTGGTGGAACTGCTGGCCACAATTAT
GGTTATTTTATGCCACCTTTGGTATTGCATGGACCTGTTGCGGGCTCAATTCATGAAAAT
GTTGGTTATTCACTGGCAGGACCAGTGAGAGGTGTGGCCATTGGTGGACCTGGAGCAGGT
ATATCAGCAAGTGCTAATAGTATTCATGCAGGCATGGATGTTGTCCCGCAAGGAGTTCCA
TATGCTGGAGGTCATCGAGGGAATCGAGTTGATAGCATACCCGGGCAAATAGGAAGTCAT
GCTGGTCAATTTTATGGATCCGCTTATAGGCCATCAACGCCAAACACCATAGCCGGTGAT
ACTTATAGGCCTGCACCATTCATGGAAAGCTCAAAGGGCTTGCCAAACACCATACCTGGT
GATTCTAGTAGGACACCGCCGTACTTGGAAGTCTCTCCGGGGTTGCCAAACACCATACCT
AGTAATGCTTATAGGCCTGCACCATACATGGAAAGCTCTAAGGGTTTGCCAAACACCATA
CCTGGTGATTCTAATAGGACACCACCGTACTTGGAAGTCTCTCCGGGGTTACCAAACACC
ATACCCAGTAATGCTTATAGGCCTGTTCCATACATGGAAAGCTCTAAGGGTTTGCCAAAC
ACCATACCTGGTGATGCTAATAGGCCATCACCAAAACTGGAAGGCTCTATGGAGTTGCCG
AACACCATAAATGGTGATGCTTATAGGCCACCACCATATTTGGAAGGCTCTATGGGGTTG
CCAAACACTAAGCCTCCACCACATCAGTTTGTTAACACTGTTCCAGCGACTGAACTAAAC
CAAAGCAGTGGCTCAAAGGCAGTTGATGCTCATCCTTCGTCCTCCTTGTACAAGCAGAGA
TAG
