Microarray Probes on PGSC0003DMT400091565
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44696_PI426222305 |
JHI_St_60k_v1 |
AAAGAGCCGGTGATGTACTGCAACGATTGCAAACTCTTCTTCCCTCAATCTCTAACTCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400091565
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400091565 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G44414.1 |
+1 |
6e-54 |
167 |
75/107 (70%) |
unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:16847781-16848086 FORWARD LENGTH=101 |
Transcript Sequence (324 bp)
>PGSC0003DMT400091565 324 pgsc_dm_v3.4
ATGTTCTTCTTCTTCGTAGGAGGCTTAGAGCAGCAGGCGAGACAGGTATTGAAGAGCGGG
GCAGGGAGGTGCATTGCGTGCGGATCACGCGCCGACCTCGTCGGTTATGAAAAGGTTCTC
AAGCTCTTCTTTGTTCCGGTGTGGAGATGGCCGGGAAAAGAGCCGGTGATGTACTGCAAC
GATTGCAAACTCTTCTTCCCTCAATCTCTAACTCCTCCGCCGTCATCCACGGCTGAGGTC
CCGGACGTTCTTAGGTGTCAGTTCTGTCGCCGGGAAGTGGACGGCGATTTCCGATTCTGT
CCCTTCTGTGGTAATGCACTGTGA
