Microarray Probes on PGSC0003DMT400091423
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12957_PI426222305 |
JHI_St_60k_v1 |
GGTCCAAGAAAGGCAAATTCTCAAATTCTTCAGAAATAAATATTGGTGGACCTTCTGTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400091423
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400091423 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G40250.1 |
+1 |
1e-90 |
278 |
170/319 (53%) |
RING/U-box superfamily protein | chr5:16086056-16087186 FORWARD LENGTH=376 |
Transcript Sequence (939 bp)
>PGSC0003DMT400091423 939 pgsc_dm_v3.4
ATGAGCAGAATCAGTCCAATTGTCCTATGGGCAATTGTAATTATTGCTATTGTGTTCTTT
GTGTTTGGTCTTCTTCATCTTCTTCGTAGGTGTTGTTTAAAGATTTCATCTTTTTCGTCA
ATTTCTCAATCCAATAGATTCCCTGAATCATCTGGTTCTCAAGTTATTCAAAGGCAACTT
CAACAGCTATTTCGTCAGCATGATTCTGGTTTAGACCAAGCTGTCATTGATACTCTGCCT
CTGTTTCTCTATAAAGATATTAAAGGCCTAAAGGAGCCATTTGATTGTGCTGTTTGTTTA
TGTGAATTTTCAGAACATGATAAGCTCAGATTGCTCCCTTTTTGTAGCCATGCTTTTCAT
ATTCATTGTATAGACACATGGTTACTGTCAAACTCAACTTGTCCTCTATGTAGAGGCATT
ATTAGTTCCACAGTTTCTATGGGAAATCCCTTATTGGGCTCAATCGAATCAAGAGAACAA
TGGAGTTTCCATTTGGAAGATGGAATTGCAAATGATGAAAAGCCGGACAATGTTGGAGAA
ATGAGAGTATTTTCTGTTCGATTAGGTAAATTGAAGAGTCTAAATGAAGGGGGCGAAAAC
CATGAAGACAAAAGTACTCAAGGGGAAATCATCAGCTGTAATTTAGATGCAAGGAGATGT
TTCTCCATGGGTTCATTTCAATATGTTGTTGGTGATTCGGAGTTACAAATCGCGTTGCCT
AATGTGAAGATTCTAAAAGCCAAGTGTGAGAACACTATTTTTGGGGCTAATGCAGAAGGA
AAAAAGATCAGTGCTAGGACTAAAGGTGAGAGCTTTTCTGTTTCAAAGATTTGGCTTTGG
TCCAAGAAAGGCAAATTCTCAAATTCTTCAGAAATAAATATTGGTGGACCTTCTGTTAAT
ATTGATATACCAATGACTAAAACAACACAATTTGTGTAA
