Microarray Probes on PGSC0003DMT400089418
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_1082_PI426222305 |
JHI_St_60k_v1 |
CGGAGGGAGCTCAGAAAAGAGGCTGAGGAAATTCATCGAAACATTAACAGCAGAACAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400089418
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400089418 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g088500.1 |
+1 |
0.0 |
839 |
444/463 (96%) |
evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch02 gene_region:45151406-45152794 transcript_region:SL2.50ch02:45151406..45152794- go_terms:GO:0080043 functional_description:C-glucosyltransferase (AHRD V1 **** C3W7B0_ORYSJ); contains Interpro domain(s) IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase |
| TAIR PP10 |
AT4G36770.1 |
+1 |
2e-35 |
137 |
123/448 (27%) |
UDP-Glycosyltransferase superfamily protein | chr4:17330217-17331590 REVERSE LENGTH=457 |
Transcript Sequence (1389 bp)
>PGSC0003DMT400089418 1389 pgsc_dm_v3.4
ATGGAGATGTCTGATTCTATTGTCAACTATGCAAAGCCAGTTCACATATTATTTCTCCCA
AGTGGTCTGGGAGTGGGACAAATGGTTCCATTTTTTCGATTAGCTTCCATGTTAGCTTCA
CACAGATGTAGAATCACCTTCATCACTATGCTACTTGAAATATCTACCACAGAGTCCATC
TTGATCAACAACTTTTTCGCCAATCACCTAGAAATCAATCGAATAGATTTTCAAATTCTT
CCTTTGAATACCTCTACTTGCTCAATTAGTGATCCATTCATCATGCAAATTGATGCTATT
AGTAACTCACTTCACCAGCTCGGCCCTCTGGTGTCTTCTTTGGATGAACCAGTTTCTGCT
ATTGTCTCAGACTTTATTCTTGCATCTAGTCTTTCACAAATAGCTAATAATCTCAATATT
CCTCTTTACAATATCTCCACAACATCAGCTAAATTTTACTCTACTGTAGCGTACCTTCCT
GTACTGTTATCCAAAGATCCTGATGCATTTAAGTACTGCTCGGGCAATCTTGAGATTCCA
GGTATAGGATCAGTTCCAAAATCAAGCATTCCCCGTTCATGGCTGGACGATTCACCATCA
AACTATGTATTGAAAGACTACTTGCTGCCAAATACTCGAGCTCTTCCTCAAGTGACTGGT
GTCTTTCTGAACACCTTTGACTGGTTTGAACCAGAAACAATTGCTTCCCTCGATGATGGA
AGAGTAACCAGTTCACTTCCACTTGTTTTTCCTGTTGGTCCTGTGGGAAATTACAACCTA
GGAGAAGACAATCAGTGTTCATGGTTAGATGAACAACCTGCTGAATCAGTTGTATATGTT
AACTTTGGTACTAGAGAGCCGATTTCTGCACAACAACTAAGAGAAATAGGAGAAGGACTA
GAGATATGCGGATATAAGTTTCTATGGGTGCTAAAAGAAGAGCTTCTAGAGTTGTTTGGG
AATACAGTCCTGGTAGAGATGGAAAAGAAAGGGAAAATAATGAAACCAGGGGATTATGAG
GCAGCTATTATGGACCATCCAGCCATTGGACTTTTCGTGAACCAGTGCGAATGGGATTCA
GTGATGAATGCAGCTTGGTCAGGAGTGCCAATGATGGCGTGGCCACAGCATGGTGATCAA
AAGTTGAATGCAGAAGTTGTAGAGAAGGCAGGATTGGGGAGGTGGGTAGAAGAATGGGGT
TGGGGTGAGGAAAATCTAGTGAATGGTGGGGAGATTGCAGAGATGGTGAAAAACTTAATG
GGAGATGTTAATATGAAGATAAATGCTATGAAAGTGAGGGAACAAGCTAGGAAGGCCAAG
GAAATCGGAGGGAGCTCAGAAAAGAGGCTGAGGAAATTCATCGAAACATTAACAGCAGAA
CAAAAATGA
