Microarray Probes on PGSC0003DMT400086922
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22223_PI426222305 |
JHI_St_60k_v1 |
CTGAATTCAGCAATTTTGATGATTTAGGAATGGATGATTTTTCCCAAGACAGTGTTGTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400086922
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400086922 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27950.1 |
+1 |
1e-58 |
197 |
146/373 (39%) |
cytokinin response factor 4 | chr4:13909732-13910739 REVERSE LENGTH=335 |
Transcript Sequence (1170 bp)
>PGSC0003DMT400086922 1170 pgsc_dm_v3.4
ATGGATCATCATTTGTTGTGTCCGATCAAATACACCGAGCACCGGAATGTTATCAGGAAA
GTTACTAAACCATCTTTGGTGAAATCAAAAAAATTCCCAGAAGCCACAAAATCCTCTCAG
TTCAATCCCTCTGTTCCGAGGACTGTTCGGATTTCTGTGACAGACCCAGACGCAACGGAT
TCTTCTAGTGATGAAGAAGACATGCTTTTTGGACGGCGACGGGTGAAAAAATACATCAAT
GAAATCAGTATTGAAACCGCCGTCAAGTGTGAAGTTAGCATTCCTAACAGTGGCAATGGC
AAAACGGTGAATAAAAGAGCACCGGAGCCTCTTCAGACTAAGCAGAAGCCAATGAAAGTT
CAACCTCCTCAATCGGCTGGCGCTGTTAGGAAGTTCCGCGGTGTGCGTCAACGGCCGTGG
GGCAAATGGGCCGCTGAGATCAGAGACCCGGCTCGCCGTGTTCGGCTTTGGTTGGGAACT
TACGACACTGCTGAAGAAGCTGCTATGGTTTATGACAACGCTGCTATTAAGCTTCGTGGG
CCAGATGCTTTAACAAACTTCAGCACTCCTCCCAAGCCGGAGCCAGAACCAGAGCCAGAG
CCGGAAATCAGTGTTCTATCTCACTCCGGCTATGAATCCGGGAATGAGTCCCGTAACATC
CCTTCTCCGACTTCTGTTTTGCGGTTTAGAATGAGCCAGTCAGAAAGTGGGTCTGACCCG
ATCCATGTTTCGGAAGAGTGTCCATCGATTCAAGGATCGATGGAATGTGAGCAAACGGTT
CAACCGTTTGTTCAATGTGCTGCTGAACCGCAGTTGGTTCAGCAGGATGTTGAGGAGTGT
CAGGGCGAGACCAGCATGATTCCTGATTACTCAAACGATTACTTGCCAACAGATATTCCA
TTCTTAAATGATTTTTTCAATTTCGATGGTTCAGCAGCTGAACAGACGTTATTTGAGGAC
TCAACTATAACATCAACAACAACAACGACACCAAATTGTCCCAATGATTTTGGCTCATTG
TACAACGATTCATTGGATTTCGGGAATGATTTCTTGTTTAACGATGCTGACTTCGCTGAA
TTCAGCAATTTTGATGATTTAGGAATGGATGATTTTTCCCAAGACAGTGTTGTTGATTAT
TCCAGTGTTGATTCTCTGTTGGCGATTTGA
