Microarray Probes on PGSC0003DMT400084778
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6439_PI426222305 |
JHI_St_60k_v1 |
GCGTCGTGTGGAGTTGAAGCAATCAGGTGGGATACAATGTTTCAAAATCTAAAACCAACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400084778
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400084778 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G80520.1 |
+1 |
7e-56 |
178 |
99/197 (50%) |
Sterile alpha motif (SAM) domain-containing protein | chr1:30276481-30277059 FORWARD LENGTH=192 |
Transcript Sequence (564 bp)
>PGSC0003DMT400084778 564 pgsc_dm_v3.4
ATGGATTGGTTTTCTTGGTTGTCCAAAACAGAGCTAGAGCCTTCTCTTGTGTATGAATAT
GGCCTAGCTTTAGCTCATAACGAGCTCGAATACGACGACGTCGTTTACTTCAACCACGAA
TTTCTCCAAAGCATAGGCATTTCGATTGGCAAACACAGATTAGAAATTCTCAAACTTGCT
AAGAAAGAAAAAGGAGCGATCCCAAATTCCATGTCGAGATTTCTCCAAGTAATTAAACGC
ACAAAGAGGCGTTTGTCAAAGTATATAAGGAATTGGGGTCATAACGAGGAATTAGCACTT
GCTTTAGTCCCAAAAAAGATTAGCAGTTCCAGATGGAAAAATTCTATGCTGAAGAGGAGG
AGGAGCAGCACAAGGGTTGCTGCAGCTAAGCAGAATACTCTGTTAATCACAAATGGGAGT
CCCAATTTCATTTCAGATTCAAGAATGAACAGTTTCTCTAGTCCGACGGTTAATGATGAA
AAAATGGGAGATGATTATTGGGCGTCGTGTGGAGTTGAAGCAATCAGGTGGGATACAATG
TTTCAAAATCTAAAACCAACTTAA
