Microarray Probes on PGSC0003DMT400084734
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24984_PI426222305 |
JHI_St_60k_v1 |
ATTCCAAAAGCCCAAAGGTTATTGTAGCAGGTGTAGCACGCCGCTTTTGTCAACAGTGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400084734
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400084734 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G43270.2 |
+3 |
7e-60 |
209 |
163/432 (38%) |
squamosa promoter binding protein-like 2 | chr5:17360527-17362143 REVERSE LENGTH=419 |
Transcript Sequence (2149 bp)
>PGSC0003DMT400084734 2149 pgsc_dm_v3.4
AGGGAGAGTACTTTGTCATAATTTAGTTCATTTTGCTCTGAGCTGTTCAATTAGTCTGGA
AAAGAAGTTGGATTAGGAGAGATAATAATATCCTGCAAGTGAGAAAGAGAATTAGTTACA
GTTTTAGAGGTAGAACAGCAAATTTGTGAACCAGCCAAGCTCTACATCATTGGGTGAGCC
TTGATGGGATGGTCTCCTTTTCTTTTTTTCTTGTCCTGAATTTGTGTACTTGCACTTTGC
TTCTTGCTTCTTGCTTCCCTGTTGTCCGACAAAATGCTTGTTTTGCCTTTTGTGAAATTA
CGTACTTGTTAAACTAGGAATAAATATCAGTTAACTTTGAGTGTAAATATTTTGCAGATT
CAAGTCTTAATTACTGTTTTGCATTCCATGAGTCTGGAAATTTGGTAAAGCCATCTCATA
GTTTCTTTCCCAAGATGGAGTGGAATGTTAAGTGGGACTGGGGAAATCTCGTAATGTTTG
GTTCAAAGGCCTCTGAAAGTCCAAAAGAACTACAATTAACAGATTGGGGAGTTGAAGAAG
AGGGAGAACTTGATGGGGGATCTTTCAATTTGTCAAGTGGCGGTAGTGGCACGGGTGGTT
ATGGTTCTGATGTGAAGTGTGGTTCTTCCATCAAAAGCTCAATATCAGCTTCTACCGACT
CTTCACCAAAGGAGGGCTTTAAAGCATCCAACTTTGCTTTTGAGGCATTTAATACCTCTC
CTGAGGATCCTAGTAAGAAATTGGAATCCTCCAAAGCTGAGGTCTCTAGAAACTCACCAC
CCATGGAGGCTTCAGTAGGCTCTGTTGAACCAGTGATAGGTCTAAAACTTGGTAAGCGGA
CATGTGAAACCTTTGGTGGTGGAAGCAGTGCTAAGGTTTCATCCTTCCCTCCGAACCCCA
CATCATCTGCTGCAACAAAGAAAGCAAAATCATCTAGTCAGAATGCACCAATTCCTCACT
GTCAGGTTGAAGGTTGCAACCTTGATCTTTCTTCAGCTAAAGAATATTATCGGAAGCATA
GAGTTTGTGACAGTCATTCCAAAAGCCCAAAGGTTATTGTAGCAGGTGTAGCACGCCGCT
TTTGTCAACAGTGTAGCAGGTTCCATAGCGTGTCTGAATTTGATGAAAAGAAGCGAAGCT
GTCGTAGGAGGCTCTCTGATCACAATGCACGGCGCCGCAAACCTCACCAGGAAACTATCC
AGTTCAATTCAGCGAGGCTTTCTTCGTTGTTTTATGATAGCAGGCAACCCATGAATCTTG
TGCTCAACCAAGCACAACTCATTCACTCCAGAGCTGCTGCGAACTCTACCTGGGAGAGCA
CTCAAGACTCTAAGTTCAGTATCACAAGAGGGTTTACTCCAAAGCCTGAAAGAACTAGCA
GCACAAATGGGAAGTCACTACTGGAGGGGATCCAGTTTTCACGGGCTGTGGGTGCACAGA
GTAATGCATCTAGCTTGCTCTTGCCCTCCAAGGGCACCACAGCCGAGGTTTTTAATCGAG
GTGCCAAGGAATCCATGTTCAATATGGTTACAGGACCGGAATTTCCTCGTGCTCTCTCTC
TTCTGTCAACTAATTCCTGGGGTTCATCCGAGCCTGAGACTGTTTCACTCAACCATGCAA
ATCAAACCAGCATGCCCGAGCAGATGATGCAGGCAATTCCACAGGGTGTGCCGCATATGT
CCAGTCAATACTGGCAGCAGGCTGGACAACATTCATCCGATACTCGTTACCATACATTGG
CTGCTAATAGTAACAGTGGCGGTAGCTTTCAGGAAATGGGAGTGTTCAAAGCTCCATTCG
ACACAGACTTTTATCTCAATGCATTGAACTGAAGCCAACATCTGATGTGTTGGTGTATTT
TCAGGATTTGGCGACCTTTCCCATTTTGACATGTCAAAACTTGAAGGTCTCTGTTTAGTA
CTGGTATATAATATATAGGTTGGGCTTTTAAACTATTAAGAAAGTCTAATATTATGATGA
ATTATGCAGTAAAATTTTGTTTGCCAGTGACATGAATTCCCAAGAATTGTAATTTCTTGA
TTCTGCAACTTGGAACATAACTGCACAGGTTCCACCTATGAATGACTGTTTATCCTTTTT
CATCATGTTCAATTATTATATTATAACATTTACGTTATTATTAGTCTTC
