Microarray Probes on PGSC0003DMT400083792
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24051_PI426222305 |
JHI_St_60k_v1 |
GCTGTGACATGGAGATAGTATTGGATACTTTCTGCTACGAGTTGAAATTGTAATTCTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083792
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083792 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G09530.1 |
+3 |
9e-20 |
91 |
63/131 (48%) |
hydroxyproline-rich glycoprotein family protein | chr5:2960080-2961192 REVERSE LENGTH=370 |
Transcript Sequence (1400 bp)
>PGSC0003DMT400083792 1400 pgsc_dm_v3.4
CCGAAACTCTTGCACACCCACATATTCTTTAATCTTCTAAGATTTGCAGAAAAATGGCTC
AGCATTACCACTTATCCTCTCTTTTACTACTTGCATTTCTCAATTTATTCTTCATTTATG
GCAACATAACTGAAGCGACTGCACGCCACCTTCTAGAGACGCCCTTCCCTGAGATTCCTA
AACCAGAACTCCCCAAAGTCCCAGCCTTGCCAAAGCCTGAAATCCCAACTGTGCCGAAGC
CTGAGCTTCCAAAACCTGAGATCCCTAATGTTCCAAAGCCTGAGCTACCAACTTTCCCGA
AGCCCCAGTTACCAACTTTGCCAAAGCCAAAGATGCCTGAGATTCCAGCAATGCCAAAAC
TAGAGTTTCCTCCCTTGAAAAAGTCAGAAATTCCAGCAGTGCCAAAGACTGAGGTTCCTC
CCACTATGAAAAAGCCTGAAGTTCCAACTTTACCAAAGCCCGAGCTACCGAATGTGCCAA
AGCCAGAAATCCCAGAACTACCAAAGCCAAAGGTCCCAGAACTTCCAAAGCCAGAAGTAC
CAACTATGCCAAAGCCTGAAATCCCAGAATTACCAAAGCCAAAAGCCCCAGAGCTTCCAA
AGATAAAAGTCCCAACAATTCCAAAGCCTGAAGTACCAACTATGCCAAAGCCAGAAATCC
CAGAACTTCCAAAGCCAAAAGTACCAACTATGCCAAAGCCTGAAATCCCAGAATTACCAA
AGCCAAAAGCCCCAGAGCTTCCAAAGATAAAAGTCCCAACAATTCCAAAGCCTGAAGTAC
CAACTATGCCAAAGCCAGAAATCCCAGAACTTCCAAAGCCAAAAGTACCAACTATGCCAA
AGCCTGAAATCCCAGAATTACCAAAGCCAAAAGCCCCAGAGCTTCCAAAGCTAAAAGTCC
CAACAATGCCAAAGCCTGAAGCACCAGCTATGCCCAAGACTGAAATCCCAGAACTACCAA
AGCCGAAAGTCCCAGAGCTTCCAAAGCTAAAAGTCCCAACAATGCCAAAGCCAGAAATCC
CAGAACTACCAAAGCCAAAACTACCAGAACTTCCAAAGCCAGAAGTACCAAAGATGCCAA
AGCCTGAAATCCCAGAACTACCAAAGCCTGAAATTCCAGAACTACCTAAACCAACTCTTC
CTTCACTTTCTCCACCATACAAACCCGCTACTCCTTGAGTAAATTATATGCTACTTTCAC
TCAATTAGAAAGTACCCAGCTGATATTTTACGATTTCCATCTCAGTCTATGAAGTTTGCC
ACCTGAGCTGTGACATGGAGATAGTATTGGATACTTTCTGCTACGAGTTGAAATTGTAAT
TCTTTTATAGAAGTATTTGAATTGGATGTACTGAGTTTGTCGTGTTATTATACTATATGA
ATGTTTTATGTATTTTTTCT
