Microarray Probes on PGSC0003DMT400083776
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24014_PI426222305 |
JHI_St_60k_v1 |
GATGGACCCTTGTGTTTCATGCTATTATTGCTGTGTGTGTTGTCTTTATGCTTTTTCTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083776
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083776 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G09460.1 |
+2 |
4e-19 |
90 |
93/256 (36%) |
sequence-specific DNA binding transcription factors;transcription regulators | chr5:2944437-2945417 REVERSE LENGTH=326 |
Transcript Sequence (3099 bp)
>PGSC0003DMT400083776 3099 pgsc_dm_v3.4
AAAAACCGTCGCTGTCTGGTAACTCACAATCTTTTTTCTCTTAAGGATTTTGGTGATATT
ACATTGCAAACTGTTTAGTTGTTCTGGTTCAGGACTTTGATGCATATGCTGCCAAATGTT
TCAGGTGCACTAACTTCCTATTGACAACATACCACGACTGCGAAAACTTCTGTAGCGTAA
AGAAGTAACAATATGCGGTGGCTGAGCCTGTCAATTGATGTGCTTTGTTGCGTCATCCCC
TTGAACTTGTATTGCAGGGTGATCCTTTAAGTCATTTCTCCTATTAAACCAGATTTCTCT
TTTCCCTCACCATTCTCTTCATCTGCCTATCAACTGTAACCAGTTAATTTTGTCTTTTTT
CTTGATAAATCTATAGGATTAGCTGAAAGATAGACAATTGCTAATCAAATTAAGTCCTCT
TAGTCCAGATTTTGATTCGTTTGCACTTTGTCACTGTGCTCATTATTGGTCTTTCAGATT
GCTTTTTTCATACTGCAATTTCCTCAAGCTTCTCCTTTGTTGTAGTCTCCATTTTCCTCC
GAAAGCTAGTACCTATTATTCTTGGGCTTCAGATATTGTCTTTTGGCATAGATTTTGAAT
ATCATTGGAAGGTTGAAAGTAGTTATGGTGTGCCAAGCCGCAAGCCAAACAAGATTTCGG
GCCTTAAAGCATGAGAATGGAATCACGGGGAGAGCAACAATTAGAGTTAGGGTTATAGCA
TGCTTTCAACCATTGCAGAATTGCCAGGTTCGTTCTATATTATTGCCTCACTTATGGATA
ATTACTGTGATATTTAACTGTTGTTTCTCAGTTGTGGGCTTCTATGATGTAATTGAAAAG
CTGCCAAACTTACAGTCTGTTTTTGCTTACCAGGCTGAATACTTCCGTCAGTTGTTGAAG
CCTGTGACGTAGATTCTCTGAGTTCACGCCTTTGTTTTAAATCCAGCTTTATAGTAATTT
CTTGTTATTTGCGTCCTTAAAGTAAATTAAGGTGGAATTTGTACAATCCATATCACTGGT
ATGCATCTAGTCTTTCTGCTGCTATTTCTGTTAAACTTCTGTTGCATTTTGCCTATGGAT
TTCCATCTAATTTCTTACATTATGCATGTTAGGTTTCTCTTCTGTCTAGATGGTTACAAC
CAGCAAGCTCCAATATTACCAGCAGGATCCTGCATGGACTTCACCAAATTTGAATTATGC
CACTACACTCTTGCAACCTGAACATCACCTTGGTGTTCCATCTCTGTATACCCCTGCCAT
ATGTGCTGCAAATGCAGTTTCTCCTAGGCGTTCAAGCTTTGTCCCTTGTTTGCCTAATTC
CAAGGACGCCCGTCACAATGGAGTCAATTGGCTGCCAAACTTAGTTCCCACCAAAAATGA
GTATCCAAGTGATACTAAACGCTTTCTTCCTCACTTGATTGGGTTTAAGTCCCCACCAAC
TGATGCATCTACAAGTTCTCAGAAGAGGTTTCTCATTTGTGATCAATCTGGGAATCAAAC
TAGATTCTTCTTTAGTCAAGGTCGTCCTGCTGAGAATGAAATTATTACACCGAAAGAAGT
GTTTGGTGCTTATGGTTTGCATCAAAATGAGAACCTGAATGTTGTAGTAGAGCAGAGATC
TCATGTGAAGCCCATTATTGGAGAGAAATCGAATGAAAGTTATGTAAATGGTGAAGAAAG
TAATACGCATGAAGATACAGATGACATCAATGCCTTGCTTTTCTCTTCTGATGACATTGA
AGGCGACGAAGATGATGATGTTTATGGTGAGGATGATGAAGTAACTAGCACAGATCGCTC
TCCTTGTGCAAAACAGGGGTGCTGCGGCTGCGGTGAGCATGAGCAACAGTCTGTGGAACT
TACAGAAGAAGTTGCCAGTTCTGATGGCACATGCAAAAGGCTAAGATTGCTAGATGGTGG
GTACAAGAAATCATCATACATAGGATCTAGATGGCCCAATGATGATGTGGAAGCAAGATG
TGTGAGAGGCTCTCTTCCTTCTAGTGGGAAGGATAAGGATTCCAGTTTGAGCACTAGGGA
AAGGAAAGTTAAAATTCGTGAAACCTTGAGGATTCTTGAGAGCTTGATTCCTGGGATAAA
GAGTAAGGACCCGTTGTTGGTTATTGATGTAGCAATCAATTACTTGAAGTCTTTGAGGGG
TAAAGCCGAAGCCTTAGTATCTGAGCTCCCTCAAGAGTATCCCCCAGCCTCTTGTTAAAG
AACAGACTAGTATCCAACCCCTACAACAGTAGCATTATGGATTTTTAGGGGTATAGTTGC
TTGGATAGTACAGAAAAGCCATATATCATTATTTGGTTGAAAGTAGTTAAATTGTGAAGC
ATTTACCATCCTCATCAGTCCTACAGTGCAACAAGTATTATTATCCACTAGAGGAAAAGA
TTTAGTGGGATTCTTTTGATCTTTTACTTGCAAGGGGTAGAACAAAAAGGGGAATGTTTT
TGGTCGACGAGGAATGATTATTTTTAGCTTTTGTGGTTAAGAAAGTAGAATTTCAAAGTT
CAAAAGATGAGTGCTGTAAATGAGGGGGGACCCTTTAAAATCTTGAGAAAACCATGGATT
CTATGCATGCGCATTTGGTGATTTGGGGTCCCACCATCCACCCTATTATGTTTCTTGAAT
TGAATGACTGTATGATGGTTTTCTTTTTGTGGTTGGTTATGTCAGGGTCAGTTTGTGCGA
CTATTTCACTTGGTACTTGCTATCTCCCACCAGCACAGGGTCAGAGTGGCTTGCTATCTC
CCACTGTTATAGGTCAGAATGAGTAGCTATGATGTTTTGATCTTTCTGTTGATTCCACAA
AGGGCATTGGTGTTGAAGAAGGTGCATTGAAAAAGGGGCCCCTTATCATGAAAAGGGTGA
TGGAGAGACATGATCAAATCTTGTCTTAAAGTTAGGTTTGTTTCCACTTTGGATGGGTGA
GTTGTAGTTGGAGACTTGTGAGTCTTTTCAGCGTGGTGTCTTTTTATGAGCCTGATGGAC
CCTTGTGTTTCATGCTATTATTGCTGTGTGTGTTGTCTTTATGCTTTTTCTACTTAAAAT
AATATACTAGTAATAAAATATAGTTTGTTTCGATATTTT
