Microarray Probes on PGSC0003DMT400083203
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3006_PI426222305 |
JHI_St_60k_v1 |
CTATGTACATAAAATAAACTTTGTAGAACATTTGCCACCACCCCCTTCACACTGAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083203
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083203 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G19040.1 |
+1 |
1e-96 |
301 |
157/286 (55%) |
isopentenyltransferase 5 | chr5:6362389-6363381 REVERSE LENGTH=330 |
Transcript Sequence (1670 bp)
>PGSC0003DMT400083203 1670 pgsc_dm_v3.4
AAACAAGAGATATATCCTTTTTTCTATCTTCTAACAACCTTAGTTACATACATATTGATG
AAAAATACATAAAATTAGTTCCAAGCTCTCTGCACACTATTTTTTTTCCTATTTTCTTCT
CAACGTTCGCCGCATAAATAAAGGTTTGTAATTAACTTAACTAACACGACGATGAATATT
GTGTTACAACATATTGCACCAACATTTGTTTCTTGCAAACATCAACCACTTAATAATTTC
CGGGATGGTCTAACGATTGATCCATTTATTCCCCCTCGACGAAAGGACAAGGTGGTGATA
GTTATGGGTGCAACAGGAACGGGAAAATCTAGACTTTCCATTGATCTAGCCAAACATTTT
TCAGCAGAGGTTGTGAATAGTGATAAAATGCAAATTTATGAAGGTCTTGATATTATAACA
AATAAGGTTACCGATAAGGAGACTTGTGGAATTCAACATCATTTGTTATCAATTATTGAT
CCTAACGAAGTTTTCACTGCGACGGACTTTTGTCAACGTGCTACAAAAGCTGTGGATTCT
ATCATAAGTAAGGGTCAACTACCGATCATTGCCGGAGGGTCAAATTCGTACATTAAGGCA
CTAGTGAATGATGACATTGAATTTAAGTCCAGGTATGAATGTTGTTTTCTTTGGATCGAT
GTAAATTTGAAAATACTACAAAGGTTTGTGTCAAAAAGAGTCGATAAGATGGTGAAAGAA
GGGCTTGTAGAGGAAGCAAGGGAATTTTTCAACCCTGATGGCGATTACACAAGTGGAATT
AGACGTGCAATTGGAGTACCAGAAATGCACCAATATTTCATTAATGAGAATAATAAGAAT
ACCCGGGACAAGATGCTTCAAATTGCTATTGAAAATATTAAAGTCAATACATACAAATTG
GCTTGTTGCCAACGTCAAAATATTCGTAGACTTGAAAGCCAATTTGAATGGAAAATAAAT
CGACTTGATGCCACTGAAGCATTTGAAAAAAAAGGTATTGAATCAAATCAAGCATGGCAT
AATATTGTTTATGAACAAAGTACTCAAATTGTTCGTCATTTTCGCGGTGAAGAACTTCTC
AATATCCCCTCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCGTCAACTTCCTTCTTGCCC
AAAGTTGCTACTATGACGCACTAGAAGAATATTGCCCACATATTGATATATGTTTACTAT
ATATATCTTCATAGTGTGACAATATTTGCTAAAATCAATAACATCATCACTACATACGTT
TGAATCTTTGTTTGTACACCCAACAATAGATCTTTCATGATCAGACATCTCGTCTGTATG
GAAGAATGGAACTACTACTCTCTTGGTGGGAAGTGCCTTATTCCCCTAGCTACATAAAGT
TGAGTGGTGGCAGCTATATGCGCGCACAAGCCAATTTTTGATACCCTATGTCATTGGGTA
TTTTTCTTTATATGGGGTTTTGTTTAAACTTTTTGAATGTCTATGTTGTATTCTATGTAC
ATAAAATAAACTTTGTAGAACATTTGCCACCACCCCCTTCACACTGAAAAAAAAAAAGGG
AGACTTAGTGGCATTTTGGATTTTATATATATTCTGTACTTTGACATGAGCTGTATTATT
CTATATATCACTTTAATGTAAAATTAAAGTATTTTGCATGTATGTACTAT
