Microarray Probes on PGSC0003DMT400083182
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28698_PI426222305 |
JHI_St_60k_v1 |
CGCGGTTAATCGAGATGATTAGCCCCTAATTAATCAGTAATTTCTTGTTAAATAAGAGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083182
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083182 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G18810.1 |
+3 |
1e-37 |
144 |
128/378 (34%) |
phytochrome kinase substrate-related | chr1:6485709-6486872 REVERSE LENGTH=387 |
Transcript Sequence (1793 bp)
>PGSC0003DMT400083182 1793 pgsc_dm_v3.4
CTTCTCTCATCTATAGTTTTCAAAGTCTATAAACTCCTTCCTATTTTATAGGTTATGAGC
TTTCTAATCTCTGTTGTCTTTCATCTCTTGTTTGTTGGTAAACTGTTTTTTTCTGAGTTT
TGTTCTGTCCCTTCCTGTCTCACAGCTTGTCATATAACTCTTCCACACTTGAAAAGATAT
TAACCGATAAAGCTCCTCCCAGAAATCGTTGCTTCTGGATCAAACTCTCTTCAAAATTTT
CATCAAACAACAGAAACCTGAAGCATTTTGTCTCCATGGAAGCCAATAATAATGTAACCA
GCCTTCGCGTAGCATCATTTTCTTGCTACCTTAGCAACCCCGATGACCAGAGCTTTTTAC
ATAAACTAGGAGGCTCTTATGAAGAGCCTTATCCTGCTGTTGTTTTACCACCTGAGAACC
CCTTTTCTGTAAGAGCTACTAAGGCACCTACTAGTAAACCATCCTCAAATAACACTCGAG
ATAACCTTGCCAATCTTCGCGTTGAGTCTTTCTCTTCTTATCTCAAGACTGAAGAAGACA
ACTTCGCATTTAAGACCTCAGGTGTTGCTCCTGTTCAAGATCCTACTATTGCATTTGTTT
TTCCTCAGCAAAAAGAAAGAACCAAGTTGAAAGACGGGGAACTAAGCATATTTGGAGCTG
ACAAGTATTTCAACAAGAAACTGGAATATGGAGCTGTCCCTACATCTGTGGTGAAGTATG
GTGGGCAGACGAACAACGGGATGGTGGATCTGCCCCACCTGAAACCCAGTTCCCGGACAG
GAACTCCAAGCATTTATTCAGAAGCAAGCAGTTTTAACAGTCAAAGTGCACTGATACAAA
ATCTTCCAAGAAATAGATATCAAACAAACCAGAAGAAGTCGACAGGAAGGAGATTTTTTG
CCAGCTTTGGTTGCCCCGGACCTTGTTCAGGAAAAAAAGCAGTCCGTGTGGATCAAAGCT
CGGAACCTGGACTTCCCCAGCCAGGATCAAAACATTCAACAGGTCATTTTGCACTAAGTT
CTGGCACGGCTTCTGTGGACGAGAAGTTGAGAATAGTCAAAAAACACTTGGATGATCAAG
ATCAAACCATAGAAGAACAAAGAAAATCAATAGAAGTGTTTGGCTCCGGAAAAATGAGAA
AAGGAGACATAGCAGTAAATTTAGAAAGGAAACTCTCCATGTTAACTTGGGATGCCATTC
CTAAAGCCCAAAACCTCCCTAGTACAACCATCGGAAGCAGTACAGTTTGCGATGACATGG
CTAGTGATGCTAGCTCTGATTTATTCGAAATTGAGAATATATCTAGCAGTGGATATGGAC
TCATGAATTCACAAACTAGCGATTACGTTCCTGGCTGCATGTCTCCAACAACTCAGTATG
CACCAAGTGAGGCCAGTATCGAGTGGAGTGTTATCACAGACAGTGCTGCTGGTTACTCAT
CAGTTATCTCAGATTATGATTCAAAGAGAATTAGCATTAGTGGTAATGCAATTCCAAGAA
ATGCAGCAAGTACAAACACCAAAACCAATAACAATGCAGTCAGCAAAGAAGATCAAAAAA
CCCGTCCAGGCGGGCTTTTAGGTTGCAAGAGCCACAAAGCAGTAAGTGTGGTTGAAACTG
TGTACAAGACTGGTGAGAATACAAAACATCACCAGCGCGGTTAATCGAGATGATTAGCCC
CTAATTAATCAGTAATTTCTTGTTAAATAAGAGTGTTGAAATAAATTCAGTTTGAATTAT
AGGAGTTTGTACTTTGTAATATCTTAAGTAATGAATTTGTATTTTTCTTGTCT
