Microarray Probes on PGSC0003DMT400083032
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28818_PI426222305 |
JHI_St_60k_v1 |
AATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083032
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083032 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19000.1 |
+2 |
1e-52 |
181 |
149/310 (48%) |
Homeodomain-like superfamily protein | chr1:6561335-6562684 REVERSE LENGTH=285 |
Transcript Sequence (1333 bp)
>PGSC0003DMT400083032 1333 pgsc_dm_v3.4
TCCACATCTCTATACACTCTCCGTTCCGCTTTATTCGCTTCTTTCTTCCTTTCAATTTCA
ATTTCAATAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTT
GTATCAATTGATTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTACAG
CGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTT
GTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTC
ACAGTACGAGCAACCGAATGCTAACAACAACAACAACGGCGGTGATAACAATGAATCCTC
TAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAA
CAGTGGTCGCGAGCGTAAGAGAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCT
TTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAA
GACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAA
CCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATCAGT
AATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTGTAGCACCAGCAACATT
ACCAACTACCAAAACCAATGCATTTCCGGTGGCACCAACTGTTGGTCCTATCATATTTCC
AGTACAGATTGACAAGTCAAGAGAGTATCCAACTCTGTTGCGACATGATCATGGGAATTC
ACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGA
CCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATT
GTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGTCAAG
TTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGATCAAAGGATCTCTTGAGAAAA
AAAGAAGAAGAAAAAACTAGGACAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCT
TATATATTGAGGAAAAGTTTATGATATCCATGTGGTGATTAATTGACTACACTTTTGGTC
CTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTA
TTTATAACATCAAACAAAACCCCTGCTAGTATCATTAAGTAAAGGGAAAGTAGTTTTCCA
TTGAAAATCACAA
