Microarray Probes on PGSC0003DMT400082693
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52779_PI426222305 |
JHI_St_60k_v1 |
CTGCTGCAGCTTCTGGTTTTTTGAATGAAGCTTTGTATAGTTTTACTTGTATCTCTATAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400082693
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400082693 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G10560.1 |
+1 |
1e-60 |
207 |
112/249 (45%) |
plant U-box 18 | chr1:3484613-3486706 FORWARD LENGTH=697 |
Transcript Sequence (931 bp)
>PGSC0003DMT400082693 931 pgsc_dm_v3.4
ATGGCTACTCTGCTGAACCTCTCAAAGAACTCTAAATGCAAAAGCACAATTGTTGGAAAT
GGAGGTTTGTTCTTGATACTTGATGTGTTGAAAGGAGGGCTAAAGATGGAAGCTCGACAG
CACGCAGCTGGTACATTATTCTACCTTACATCAGTAGAAGAGTACCGTAAAATGATGGGA
GAAAATCCAGAGTTCATTCCATCACTTTTGGAGTTGCTAAGAAATGGCACTGACAGAGGA
AAAAAGAATGCCTTGGTCACCATTTTTGGCCTCCTAATGCGCCCCGAAAACCACTGGAGA
GTGATTGCTGCTGGATTAGTCCCCTTGGTGGTTAATCTGTTGAAATCTTTCGAAAGGGAA
GATCTCATTACAGATTCTTTAGCAGTTTTAACAACGCTTTCTGAAAGGCTAGACGGAGCA
ATGGCTGTTCTTTATGCTGGAGCTTTGCCTATTATTGTCAATGTTCTAAGTTCTTGCAAT
TCAAGGGCATCAAAAGAGTACTGTGTCTCATTGTTGCTGGCTTTGTGTATCAATGGTGGA
GCAGATGCAGTTCCTGTTTTAGTAAAGAACTCATCTCTCATGGGACCGTTATATTCCCTC
CTGGCTGAAGGCAACTCAAAAGCAAGCAAGAAAGCTAGTACACTCATCAGAATCTTGCAC
GAGTACAACGAGAAGACCTCATCTGGCTTGATCACTCCAGTTTTTATAGAGGATCAATTC
ATTAATGTATGGTAATTATTTACAAGCATCCAACATGTATATATACACCATGGTGTAGGA
TGCTTTAGTGTCATTTTCCTTTACTGGTGATATCGGCTCAAGTTTTTAAGAGCTAGTCAC
ACTACACTGCTGCAGCTTCTGGTTTTTTGAATGAAGCTTTGTATAGTTTTACTTGTATCT
CTATACTTTCTGATGTTAATGTGAATTGTTG
