Microarray Probes on PGSC0003DMT400082026
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28016_PI426222305 |
JHI_St_60k_v1 |
AACATCCCCTTGAGGTGCTGCCCTTTCTCTGTGAAAGAAATCACTAATGCTTTTTATGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400082026
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400082026 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52820.1 |
+3 |
8e-10 |
45 |
22/44 (50%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19669216-19670321 FORWARD LENGTH=317 |
Transcript Sequence (642 bp)
>PGSC0003DMT400082026 642 pgsc_dm_v3.4
TTTAAGCCCAACTAGAAGCTAAGATCAGAGCAGTTTTGAAGTAACGATAAGATTGTTTGT
ATGTGATATATAGATTACGATGCGGGCTTGATCGAGAAAAAATCACTAATATTTTCTATT
AGATTAGATTGTTTTCCTAACATCCCCTTGAGGTGCTGCCCTTTCTCTGTGAAAGAAATC
ACTAATGCTTTTTATGTGTCGATGTTGTGGATTTATACAGGCATGGACAAATAATAGTTT
GACATCTGCTGAACACAGAGTAGTACCAACAGGAGACAAAGATAGATTATCTATTCAATT
ATTTTCCATACCACATCCAGATTATACTGTGAAGGACCCCAAAAGAATTAGTGGATGAAG
ACCACCCTTTACTCTTCAAGCCTTTTAACTTGCTTGAATTTCATAAATAAACTATGTCAG
GTGATAAAAATGGAATTAATCTCAAGAATTATTGTGGTCTTTAAAATTTTTGTAGGGTAT
GAAAATTTATATATGTGTATTTTCTTTATGAATAAAATGTATCGTATGTATGGGTGGTTG
AAAATTTATATTTGAATGGTTATTGCATATGATTACATAACGTATTGTATTGTGTTGCGT
TGTATTGTAATGTATTGTACTGTATTATTTTTATTAAAAAAT
