Microarray Probes on PGSC0003DMT400082008
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28032_PI426222305 |
JHI_St_60k_v1 |
GTACTAATGGAGAGATTAGGACTGATTGTAAGAGGGTTAATTAGTTAATTAGGAGTGGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400082008
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400082008 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G06720.1 |
+1 |
3e-140 |
407 |
200/321 (62%) |
peroxidase 2 | chr5:2077567-2078857 REVERSE LENGTH=335 |
Transcript Sequence (1235 bp)
>PGSC0003DMT400082008 1235 pgsc_dm_v3.4
CTTGAGTATTCTTGAAAGAAAAAGAAATAAAAAAGTTGTCATCACTCATCAATAATGTCT
TTTTTGAGATTTATTGTTCCAATTTTCTTCTTGATTTCAATTTTCGTAGCATCGAATGCT
CAATTAAGTTCTACATTTTATGCTACTACTTGCCCTAATGTTACTGAAGTTGTACGTGGT
GTCATGGAACAAACTCAACGTACCGATGTTCGTGCTGGTGCCAAAATTATTCGCCTTCAT
TTTCACGATTGCTTCGTTAATGGTTGTGATGGATCTATTTTGCTAGATAATGCAACTGGG
ATTATAAGTGAAAAAGATGCAGCTGCAAATGTTGGTGCTGGAGGATTTGAAATTGTGGAT
GATATTAAAACTGCATTGGAAAATGTGTGCCCCGGTGTTGTATCTTGTGCTGATATTTTA
GCTCTTGCATCTGAAATCGGAGTTGCCTTGGTTGGAGGTCCAACATGGCAAGTTCTTTTA
GGGAGAAGAGATAGCTTAACAGCAAATAGAACTGGAGTTGATAGTGATATCCCAAGCCCA
GTTGAAAGTCTTGATGTTATGAGACCACAATTCACCAACAAGGGAATGGATATAACTGAT
CTTGTTGCTCTATCAGGTGCACATACATTTGGAAGAGCAAGATGTAGGACATTTCAACAA
AGACTTTTCAACTTTAATGGAAGTGGTAGCCCTGATCCAACAATAAACTCAACTTATTTA
CCAACACTACAAGGAACTTGTCCACAAGGAAACGATGGAAATACTTTTGAAAATCTTGAT
AAAACAACTCCAGATAATTTTGATAATGACTATTACATAAATCTTCAAAATCAAGAAGGT
CTACTTCAAACAGATCAAGAATTATTTTCGACATCGGGATCCGATACAATCGCGATAGTG
AATCGTTACGCGGGTAGTCAGACTCAATTTTTCGATGATTTTGCTAGCTCGATGATTAAA
TTGGGAAATATCGGTGCGTTAACGGGTACTAATGGAGAGATTAGGACTGATTGTAAGAGG
GTTAATTAGTTAATTAGGAGTGGTTTATAAGTTATAATATATGCATGATAAATTGTGTTT
ATGTTTATGTACCAAAAGAGAGATACTATAATGTCTTGATCAAGTGTAATTTTGCTTTTG
TTTAAATGTAATATGTGCTAAAATAGCAATCCTAAATAAATAAGAATGGTATGCTAAAAA
GCAATACCAAGTTTTATAATATACTTCGATCTGTT
