Microarray Probes on PGSC0003DMT400081936
Probe ID | Chip | Probe Sequence |
---|
CUST_27976_PI426222305 |
JHI_St_60k_v1 |
GGATTTAGTACTACAAATGTTGCTCTTAAGCAAGGCATTACCATGTTCCGTTCTTAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081936
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081936 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G51680.1 |
+2 |
4e-69 |
222 |
132/267 (49%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr3:19173622-19174667 REVERSE LENGTH=303 |
Transcript Sequence (1100 bp)
>PGSC0003DMT400081936 1100 pgsc_dm_v3.4
AAGTCAGCTTCCAATAATTGGAAGTATTTACAAATTAAATAGTTGCACAAGTAATTATTA
TTAATTAAAAACAATTAATTATAAGATATATCCTAATTAGAAAACAAGTACTAATTAATA
AGAGCCATTGGACTAGTACTAGTACCATTCTCCCTAACAAGTAATCTTCCTCATTTTCAA
GCACTCAAAGAAGAATTCCATGGCCTCCAATGCTAAAAGGCTAGAGGGTAAAATTGCTAT
CGTAACAGGAGGTGCTAGCGGAATTGGTGAAGCTACAACAAGACTTTTCATCAAACATGG
TGCAAAAGTCGTAATTGCGGATATTCAAGACGATCTTGGTCAATCCATCATTCAAGAAAT
AGGCGAAAATGATGTCATCTCTTACATGCATTGTGATGTTAAAGTGGAAAAAGATGTCGA
AAATGTAGTGGACATGACGGTCTCTAAGTACGGTAAACTTGACATCATGTTCAGCAACGC
AGGAATTTCTGAAGAACTCGATTCCACCATCTCAAAAATCGACTACGAAATTTTCAAAAA
CGTATTTGATGTGAACGTCTTTGGGGCTTTAATGTGCGCCAAACATGCATCTCGTGTGAT
GATTCCGGCCAAAAAAGGTAGCATTATATTCACATCGAGTATTGCGTCCGTTATGTGTGC
CGGCGCGTCGCACACGTATTTGGCATCGAAACATGCCGTGGTAGGTCTAGCCAAGAACTT
AGGTGTTGAATTAGGGCAACATGGAATTAGGGTTAATTGTGTTTCTCCATTTTGTGTGCC
AACTCCAATGTTAAAGAATGGTCTTGGAATTGATGAAAAGGAAAAGATTGAGGAATTTGT
GTGTGAAATTGCAAATCTTAAAGAGACAATATTGGACGTTGAGGATGTTGCACAAGCAAC
ATTGTATCTTGCTAGTGATGAATCAAAATATATAAGTGGGATGAATATTGTGATTGATGG
TGGATTTAGTACTACAAATGTTGCTCTTAAGCAAGGCATTACCATGTTCCGTTCTTAAAT
ATAATATTTATTTTGATTTGTTACTGAAATTTTATCGTATCTCTAATAAAACTGCTATTA
TATGTAATGATATGGTGAAA