Microarray Probes on PGSC0003DMT400081825
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28020_PI426222305 |
JHI_St_60k_v1 |
ATGAGCTGGTATTGATGCTAATCAGGCATACTTTATATTCGTTTTGACCATGTTCAGATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081825
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081825 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G10250.1 |
+1 |
7e-28 |
115 |
68/175 (39%) |
Plant protein 1589 of unknown function | chr3:3168371-3170418 REVERSE LENGTH=324 |
Transcript Sequence (1862 bp)
>PGSC0003DMT400081825 1862 pgsc_dm_v3.4
CTTGAAAAAGCTATGTATATAGTTATTTCGTCTCTAATGTGTTCCACACGTGCAAGTGTT
AATTCTCCTACAACTCCCCTTACAATGTTGTATTCCGTTCTTAAGAAAAGAGATTTTCAC
ATACTGCCAGTATGATACTGGGGCCAGTGTTAGTTGGGCGCTAATGTAGGAGGAATGCCA
GATGTAGTGTTCATGGGTATGGAACTATGTATTGTTAGAATGTCAAGTGTTAGCTTTAGA
ATAGTGTTAAAGAATGAGATGATAATTTTGTTGTCCAACGTCAAACAAGTACTATGTAAG
TCTTGGGTTTGACACCAATAAGTTGGTGTCTTGTATTCCATTATCGTTAAGTCTTCAATG
TCTTATCTTCTATTTTTATTTTTCCACTTGGTACCAAGGCAGCACTATGTTCCTATGTTC
CTTTCTGGCAACCATTCTGGCATCAGCTCACCTTTTTCTGATGAATGTTCTGGTGATACC
ACACCTCTTTATGGTGACTGTTCTAGTAGTGCCATGCCTTTCTGGGTGACCGTTTCAAGG
ACGCTGCGTCTCTTGTGCTGACGATTTCTAGTATTTGCATCTTTCTGGCCATTGTTTTGA
GCAACATCTTTTCTGCTGAGTTAACGGAGACCAGAGCTGTTCAGCCAGATTTTCTGGTCA
AAAGATTTAGCTGTACCTGTATAAGACGGAAGAGAAGACGTAGCACATGAGATGTTGCTC
CTCTTATGTCGAGAGAAGAATACTGAATTTTTGATTGAGTAGAGAAGGATTTTGCATTTA
AGGAATAACCTCTTACCCCTTACTTCTTTGGTGCATCCATGAGGTTCCCCACTTGTATAG
AAGTTTGGGTGCCTTTCGGAGAAAGCCATATCATCACTGTTTAGTTTACCTCTTGTATAA
GGGCAATTGTTGTTCTTGTTCTTTTGAATGAGATTTATTACATTATCAAAAAGATTTAGC
TTAGTTTGTCTGATCTTTTCTGCAACAAGCATGACGAGCATCGTTTTCAGTATGGAGCCT
GCCACTAAGCTTTTGTCTAGACTTATCCTTATCTTCATTGCCTTCTATTTGCTTGTTACC
TGTGTTCTTGCTAGAACCTGCATTTGAGAAGCTGTGTTGTTGTCTCTAGTTAATGTTAAG
TTTTCTTGCCTTACTGCAGTGCATCAAAGTTCAACTTGTGGTGCTGCGGAAAATGTTGGA
ACTGCTGCAAAGCCTAATGGCATGCACGAACCTGTACATGCTGATAGACCCAATGCATTC
AGTAACAGCAGCTCATCTGTTCTCTCTTGCATGCAAACAACAATTGATATTCCTTCTCAA
AGCAGGAAAATTGATGGTCCTCCTAGTATGTTTTTGGGCCAGCCCTCTAACATGGGGATG
AGACAAACAATGGATGGGAGGATTATTAAGACAGAACCTATCTATGGTGGCAATTCTCCG
TTTGCCTTTGGTCCTCATGGCACTTACTTGGAGTCACGTTCTGCAATGGGCGATGCATCT
GTTTCATCGTTTAGTAGTGTGGAGTCGAACACACAACCTCTTAATGAACCTCTTCTGGAT
GCTGACACTTCTTCGTTTGGATATCTAGGGGATATACCTCAAAATTTTGGTTTCTCAGAC
TTGACTGTTGATTTCACTAATAGTTCTGGTATGTGTCTTCCTCTCCCTATTTTCTCCGTA
ATTTCACCAAGCATCTCTGGATTCGTCTTTTTCACTTTCAACGTTTCAGGTATTAAAATG
AGCTGGTATTGATGCTAATCAGGCATACTTTATATTCGTTTTGACCATGTTCAGATATAT
TAGGGAGCTACTCTAGGACTCCCTTTCTAGCAACAGATACTGGCAACTTGCTCGATTCAA
AT
