Microarray Probes on PGSC0003DMT400081223
Probe ID | Chip | Probe Sequence |
---|
CUST_45145_PI426222305 |
JHI_St_60k_v1 |
ATCGACTCCTCATGTACTTTGCAGAGGGAGGTGGATTATTTATGTGGAGCACAAACTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081223
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081223 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G20560.1 |
+3 |
4e-163 |
470 |
257/348 (74%) |
DNAJ heat shock family protein | chr2:8848353-8849815 REVERSE LENGTH=337 |
Transcript Sequence (1572 bp)
>PGSC0003DMT400081223 1572 pgsc_dm_v3.4
CGAATTTGTTTCCACGTCAAAATAACAGCACTGAACTGAAGTCCGGAAAGTTCTACATTC
TTCCCTCTTCTACTGCTCTGTTTTCTAGACCCATCTCTCCTTCTCTTAATAAAACTCTAC
CCACAACCAAATTCCAAAACACAAAACTTCAATCATTCAATTTACACTACAACAAACATA
CATATCCTCTACATAAATTTGCCTCTTATTTATCTTTCTATCAAATATCAAATTTTGAGT
TCAAAAACTGGTAATAGAAGATGGGTGTAGATTACTATAAGATATTGCAAGTTGATAAGA
GTGCTACAGATGATGAACTGAAGAAAGCTTATAGGAAATTGGCTATGAAATGGCATCCTG
ATAAGAACCCAAATAACAAGAAAGAAGCTGAGGCTAAATTCAAACAGATCTCTGAAGCTT
ATGAGGTTCTGAGTGATTCACAGAAAAGGGCAATTTATGATCAGTATGGGGAAGAAGGCC
TTAAAGGTCAAGTGCCACCACCAGATGCTGCTGCTGGTGGACCTGGTGGGGCTACATATT
TCCATACAGGTGATGGTCCAAATGTGTTTAGATTCAATCCAAGAAATGCCAATGATATCT
TTGCAGAATTTTTCGGGTTTCAAACCCCGTTTGGTGGTGGGATGGGAGGTGGTGGTGGTG
GGATGAGAGGTGCAAGGTTTTCTAGTTCAATGTTTGGGGATGATATCTTCAGTTCATTTG
GAGAAGGCAGACCAGCGATACGGAAGGCGCCACCGATTGAACGAACAGTCCCTTGTAGTC
TAGAAGAACTTTATAATGGGACAACCAAGAAGATGAAGATCTCTAGGGAGATTGCTGATG
CAAGTGGGAAGACTTTACCAGTAGAAGAAATTCTGACCATTATAATCAAACCTGGCTGGA
AAAAGGGAACTAAGATTACATTCACAGAGAAAGGAAACGAAGAGCCAAACGTCCTTCCTG
CAGATCTCGTGTTCACAATTGATCAGAAACCACACAGTGTTTTCACAAGGGACGGGAATG
ACCTTGTGATCAATCAGAATATCTCACTTGTTGAAGCATTAACAGGCTACACGGCCCATG
TAACAACGCTCGATGGAAGAAAACTGACTATTCCTATCAACAAGGTCATACACCCAAACT
ATGAAGAGATTGTCCCAAAGGAAGGAATGCCAATACCCAAAGATCCTTCCAAGAGAGGGA
ATTTGAGGATCAAGTTTGATATCAAGTTCCCTACAAGGTTAACAGCTGACCAGAAGACTG
GAATTAAGAAGTTACTTCCTTCCTAGGCCAAACCCATAGCATCTTTACACAAGTCTGTGT
ACTGTTTTTGTTACTTTCTTTTATTATTTACTATCTTGGGTAATTGGTTCCCTTGTAGTG
TTTGCATATTATAGCTTAGAATTGTCTGTGTAAGTCAATAAATATGTGATAGTAATAAAG
TATTTTGACATTTTACAACTCTTCAACAGTTCTCTTTTGCTGAAGTTGGAGTCTAATGTG
TATGATAAATGTATCGACTCCTCATGTACTTTGCAGAGGGAGGTGGATTATTTATGTGGA
GCACAAACTTGC