Microarray Probes on PGSC0003DMT400080576
Probe ID | Chip | Probe Sequence |
---|
CUST_29447_PI426222305 |
JHI_St_60k_v1 |
ATGTTCAGAGAGTTGAGATAAAGCAATTCTCACTGGGGGATGAGCCTCTCTCTGTTAGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080576
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080576 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G19830.1 |
+3 |
0.0 |
726 |
406/631 (64%) |
Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:6886338-6889974 REVERSE LENGTH=693 |
Transcript Sequence (3096 bp)
>PGSC0003DMT400080576 3096 pgsc_dm_v3.4
GGTGGGTGGTGCTTTCACACATAGAGGTGGTGTGTTTTCCCTTTGCCAAAATTGCTGCAA
ATTTTTGCGGCCTTTAAACTTCCTCTGTGATTCCCTGTAATCATATAAGGATCAAATTCC
TGATTCCATATTTGTACCTTCCTTTTAGCCTTTTCACTTTCTCTCTCTATCTTTGTTTCT
CTCTCTAACACACGCAGAGAGTCTTTTGTACATGCATCCATGTGTGCTGAAAAAACTGGG
AATTTCATAGCTTGTAATGTTGTTTTCAGTTCTCTTTGAAAAAGATAAAGCTTTGAGCAA
TTTGGGTTTTGGGTTTGGATTCATGTTTATTGGTACTTCATTGTATACTTCAAGTTCAAG
AACTGTTAGTTATAGCTCAAAAGGCATCTGGGTTTTTGATATTAATGGTTTTTGATTCAG
TTTCTGCTATTACCCCTGATTTCCCTAACGTATTTTGGGTAAACCCATCTCCTTCTCCAT
GTAAAAGTAATGGCAATTCGTTGGTGACGAGGAGGAGGAGTAGGGGGAAATTGGGTTTGG
ATTCGAGTTGGAGGTATAGGATTCGTGCGAAATGGGCAATTCGAGCTTGTGTGAATGGTG
GAGACCACCATAATTTTGACATGCAGATTACGAATAGTGCTAGAAGAGGAGCTAGAAATA
TTGTAGTTAAGAGATTTGCTGATGAATTGGATGCTTATGGAAGAGTCTCTGAGGAATTAG
AAGCTGCTAGTCGTTCTAGTAACAATTTTGCTAGTTTTCAAGAAGACCCTTTTGTAGATA
AGCTAAGGACTCAATTGGGGGTGATGCATCCATTACCTTCACCTCCAATAAATCGAAATA
TTTTCGGTCTTTTTGCATTGTTTTTCTTTGTTGGTATTGTTTTTGATAAGGTTTGGACAT
CTAGAAAGAGTAATGCTAAGTCAAACAATGGAGGAAACTCCGGGATATGGTCACAGGTCC
CAGCAAACCTTTCTTCATTGTTGGAGAAGGATTTGCAAAGGAAAGAGTCAGTGGAGTGGG
TAAACATGGTGTTAGGGAAGTTGTGGAAGGTCTATAAACCTAGGATTGAGAATTGGATCA
TTGGTTTGCTTCAGCCTGTCATTGATAATCTCAAAAAGCCTGATTATGTTCAGAGAGTTG
AGATAAAGCAATTCTCACTGGGGGATGAGCCTCTCTCTGTTAGGAGCGTGGAGCGGAAAA
CTTCTCGTGGAGTCAATGATTTGCAGTATCAGATAGGTCTCCGATACACTGGTGGTGCTC
GCATGCTGTTAATGCTGTCACTAAAATTTGGAGTCATCCCCATTTCTGTGCCAGTCGGTG
TTCGGAACTTTGACATTGATGGTGAACTCTGGGTCAAGTTACGATTAATACAAACAGAGC
CTTGGATTGGAGCTGTTTCTTGGGCTTTTGTTTCCCTTCCCAAGATAAAGCTTGACTTGT
CACCATTCCGTTTGTTCAACCTAATGGCAATTCCTGTTCTATCAATGTTTTTGAAGAAAC
TTCTTACTGAGGATTTACCTCGTCTCTTTGTTCGTCCGAAAAAAATTGTGTTGGATTTTC
AGAAAGGGAAAACAGTCGGCCCTATTCCAAGTGATCCTAAGTCTGGTCAAAGTGAACAAC
TTAAGACTGGAGAAATGCAAGAAGGAAATAATGACTTTGCTGGAGAACTATCAGTGACTC
TTGTTGATGCAAGGAAACTCTCTTATATCATCTATGGAAAAACTGATCCATATGTTAATC
TAAGACTTGGAGATCAAGTAATACGCAGCAAAAGAAACAGTCAAACTACTGTTATTGGAC
CTCCTGGAGAGCCTATATGGAATCAGGATTTTCACATGTTTGTCACAAACCCCAGGGGAC
AAAAGCTATATATAGAAGCAAAGGATTCCTTTGGTTTTACAGATTTGACTATTGGCTCAG
GGGAGGTTGATCTGGTATCTCTCGAAGATACTGTACCGACAGACAAAATTGTGATCCTCC
GAGGTTGGGGACTACTGGGACCAAGGCCTGTAGGAGAGATTTTACTGCGACTGACATATA
AAGCTTACGTCGAAGATGAGGAGGACGAAAGGATTGAAGCAAGATCCAAGTATTTGGATG
CTTCAGATGATGAATCATCTGACTTGGATGAACGAGATACTGCTGTGTATGAGCAGCGTA
GTGGAACAGATAAAGAATCATTTATGGATTTATTAGCAGCATTAATTGTCAGCGAGGAAT
TCCAAGGGATCGTGGCATCTGAAACAGGCAATACTAAATCTGTAGATGATTTTAAAACTA
GAGTGTCAACATCAAGACAACGTACTCCTTCTAGGTCTGTACAGCAAACTTCTGATACTG
TTCCTGAAAACTTTGGAGAATCACCCCTGTTTTGGCTAGCGATTATTACAAGTATCTCAG
TTCTAATTGCTCTCAACGTCAGTGGTTCTAGCATTTTCAATCCATGAATAATGAAACAAA
ATAAGATTGATAGCTCCTGGTAAAGAATACAATATAGAGTTCCTGCTGGAATTATTCTGT
CAAACCACACATAGTTGTCACCACTCTGAGATTGCCCGAACGGAAACCTTATCAAAGTCC
TTACCTTCTGCCGGTCTTCCATTCGAGGCTGGGCAACTGCTTCCTCCATTATCTGTAAAC
TATTGTACACTCTTTAACATTTTAACCAGATCAACAACTCAAACCCTCCCCCCTCCCCTA
CCCCACAACTCCAATAGCAAATGATAGGAATCCCCAGACACAAAAAAGAGAAGAGAACAA
CAAAAAATATGTTACAATGAGGTATGTATATATTGGCGGCAGATTTTGGCCATCCTTGTT
CTCTTGGTATTTGTTACATCCCGTGAATTCTAAGTCTCTCTCTCCGTGTGTGTATGTGTG
TGCGCGTGTATGCCAACTGTCGTAGCTATAGCAGCACAATGAGGTTTTTGACATTCAATC
GCGAGGGTGTACTAAGCCGTTGAAACTAGTGAAATACACCTTTCTTTTTCTTCATTGTTG
AAGTGGTAAGTGAAAGGGCGCTGGCATTACTAAAAGACGTTACTGTCAGTGTCGCGTATT
TACGTAGCTGTAGAGTATTTCAACATCCCGTTATCG