Microarray Probes on PGSC0003DMT400080505
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29742_PI426222305 |
JHI_St_60k_v1 |
GTACATCAACCAAAAAGCTTCGCCTTAGGGTTGATTAAATAATTTTATGCGACAACTTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080505
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080505 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41190.1 |
+2 |
1e-11 |
66 |
42/66 (64%) |
Transmembrane amino acid transporter family protein | chr2:17167561-17170145 REVERSE LENGTH=536 |
Transcript Sequence (1106 bp)
>PGSC0003DMT400080505 1106 pgsc_dm_v3.4
ATTAGCTGTATGAAGCGTTCTGATCTGGGTTCTTTACAATTTTGTTGAAAACAAGCTGAC
ACGAAGATTCAGCATTGCTGGTTAAATAAGAAGCTATTATAGATAGGATAAGGATGACGT
AAATATGGAGGTTCAGAAAAAAATGGTTTTGATGTTATATTAAGCACATATATTGCCCAT
AACAACCGGAATAATTTGCTTGGATGTTTTTGGTTGTGCTTGCACCATTTTAAATCCATT
AAGATATGGATTGCATTTGGAATAACAAAGTAATATGGAGAGTTTAAGCTGTGATGGAAG
CTGTTCCTCTGTGAATTGCATTCCTAAAGCACCAAATTCGTACATCAACCAAAAAGCTTC
GCCTTAGGGTTGATTAAATAATTTTATGCGACAACTTCTAATTATACAGTGATAAATCAT
CTTTGTTCCAGGTCTTGTGATGGCTCTGATTGGTTCTCTTCTCAGTATACTGGTGTCTGT
AATAATGCCAGCTTTATGTTACCTAAAGATCATCGGAAAGAAAGCAACAAGGACACAGAG
GGTGTTTAGCATCACTGTTATTGCAGTTGGCATTGTAAGTGCTGCTCTTGGAACTTACTC
CTCACTGTCAGGAATCGCAAACAAGTATTGAAGTAAAGCCTAACCACACACACCCCAGAC
CCCCTTTTCTTTAGGGTGGGGGTGGACATGTTTGCCATAAAACATTCTTATTTACTGTCC
TGTACTTTTGATCTCTTTCCCAAATATTATCCATCTTCTTCTCAGTTTCACTTCATAGTA
ACTTTACGACCCCCTATTGCTTTATAATTATGGGGTATCTTTCTCAGTGTGTATTAGCTG
CTAGTGTTTCAAGTAGAAAGTATCTGTTGCATTATAGAGTAAACAACATAAACTAGGATG
TTGAGTTGATCAAAATAATCTTATGAGACGTTGTAAAATATGTACATGGTATATATCTGT
ACTTGTGCTGAGGGTAAAAACCCTATATGGTAAGGACATAATTAATTAGTTTATAGTTTT
CTATTTTTCATGTACTCGCATCAAGTGAACGAAATGACGGATGTGAGTTGTCAATAAATA
AATTATAAACATTACTTGGGAGAAAA
