Microarray Probes on PGSC0003DMT400080317
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48675_PI426222305 |
JHI_St_60k_v1 |
TGCTTTTTAGCACTGAGCAGTAGTTCCTGTGTTGGTAAATTTTGACTGATGAATCACAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080317
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080317 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G14790.1 |
+2 |
7e-108 |
346 |
169/251 (67%) |
RNA-dependent RNA polymerase 1 | chr1:5094317-5097817 REVERSE LENGTH=1107 |
Transcript Sequence (1315 bp)
>PGSC0003DMT400080317 1315 pgsc_dm_v3.4
GGAGTTACATCTCTGATGAAAGAGCACTTACACTCTTGAATTTGTAGTAGGGAATGAACT
CTTGAAATCATACTTATAAGATGTGTAATGCAATACAAGTACTGAGGAACTCTTTATTAT
TTTTTGTTTGTTGTGGGAGAGGGGGGATTGGCCAGTATGTGCAACAACAGTGCAAGTACT
GAGGAACTCCTTTTCACCTGTCTGCCTACTGCAGGAAGTTGAAGAGTACTTCACCAACTA
TATTGTGAATGACAGTTTGGGAATCATAGCAAATGCCCATGTCGTATTTGCAGACAGAGA
ACCTGATATGGCCATGAGTGATCCATGCAAAAAACTTGCTGAGCTCTTTTCAATTGCAGT
GGACTTTCCAAAGACTGGTGTTCCTGCTGAAATACCATCTCAGTTGCGCCCTAAAGAATA
CCCAGACTTCATGGATAAGCCGCCAGACAAGACAACCTATATCTCAGAAAGAGTTATTGG
AAAGCTTTACAGGAAAGTGAAGGACAAAGCTCCTCAGGCTAGCTCTACTGCGATATTCAC
AAGGGATGTTGCAAGGAGATCATATGATGCTGATTTGGAAGTTGATGGATTTGAAGATTA
CATTGACGAAGCTTTTGACTACAAAACTGAATATGACAACAAGCTGGGTAATTTAATGGA
CTACTATGGCATAAAAACGGAGGCTGAAATACTTAGTGGTGGCATCATGAAGACATCAAA
AACTTTTGATCGCAGAAAAGATGCTGAGGCCATTAGTATTGCTGTGAGGGCCTTGAGGAA
GGAAGCAAGGACCTGGTTCAAGAGGCGTAATGATATAGATGACATGTTACCAAAGGCTTC
GGCTTGGTACCACGTTACATATCATCCTACATATTGGGGTTGCTACAATCAGGGGTTGAA
AAGAGATCATTTCATTAGCTTTCCCTGGTGTGTTTATGACCAGCTAATCCAGATTAAGAA
GGAGAAAGCACTTAACAGGCCAGTTCTCAATTTGTCATCTCTCAGGGCTCAGCTGAGTCA
CAAATTAGTGTTGAAATGAGATTTCAGTCAAGCGTTAAGCTGATATATATATATATATAT
AAATGTAATAGGGGTGTGATCATAAGAAAACTGCTATGCGTTGTTAACAACCTTTTGTAT
TCAAAACTGCATGAACCTGTAACATATATGCAGTATCTTAGAAACTGCTGTACAGCTAAG
TACTAATATGTATGTGGTTTGAGTTTTATCTCTCTTCTCAACATAGTTCATATTATGCTT
TTTAGCACTGAGCAGTAGTTCCTGTGTTGGTAAATTTTGACTGATGAATCACAAA
