Microarray Probes on PGSC0003DMT400080115
Probe ID | Chip | Probe Sequence |
---|
CUST_50228_PI426222305 |
JHI_St_60k_v1 |
GCTAAAACAATTCACGTTTCTCATGAATCAGTATTTCCTATAGATACTCGACTCACGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080115
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080115 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G13700.1 |
+1 |
4e-121 |
384 |
178/249 (71%) |
purple acid phosphatase 23 | chr4:7957072-7958919 REVERSE LENGTH=458 |
Transcript Sequence (3332 bp)
>PGSC0003DMT400080115 3332 pgsc_dm_v3.4
GGCTCAAGTGTTCCAACCAACATAAGAAACACATGAATGCTTTGTTAAACTAAATTCCAG
TTTTGAGAGATGAAGAAAATTTGTACTACACTTTGGTTACAATTTTTTGTTGTAATTATA
GTTGCTAAGAGAATACCAACAACATTGGATGGACCATTTAAGCCACTAACTCATAGATTT
GATCCTTTATTGCATAAAGGAAGTGATGATTTGCCAATGGATCATCCAAGGCTTAAGAGG
AATGTAATTTCATTTTTTCCAGAACAAATTGCTCTTGCTTTGTCAACTACTTCATCTTTA
ATGTGGATTTCTTGGATCACTGGTGAAGCTCAGATTGGTCTAAACGTGACTCCACACGAT
CCGAAAACAGTGGCGAGTGAGGTATGGTATGGGAAGGAAAGTGGGAAGTACACAATGAAG
CAAAATGGAGTTTCAGTTGTTTACAGTCAATTGTATCCCTTTGAAGGGCTATGGAACTAC
ACTTCTGGCATCATTCATCATGTGAAGATTGATGGTCTTGAACCTGAAACAAAGTATTAC
TACAAGTGTGGTGATAGTTCTTTAGTAGCAATGAGTGATGAACTTGCATTTGAGACCTTT
CCATTGCCTGCACCTAACAAGTATCCACGACGAATAGCAGTTGTTGGTGACTTAGGTCTT
ACAAGCAATACAACCACAACAATTGATCATCTCATAATGAATGATCCTTCCATGATATTG
ATGGTTGGAGATTTAACTTACGCGAATCAATACCTTACCACTGGTGGTAAAGGAGCTTCA
TGCTATTCTTGTCAGTTTCCAGATGCACCGATAAGAGAAACATTTCAACCTCGATGGGAT
GGATGGGGAAGGTCATCTATTCTTTTCCTCACATAACTAATCTCCTTCGTCTTTTAAAAC
TTTTTAGCTCTATGCAATTGTTTGTTTCAGGTGTGAGGCTCGTGTTGATGCTAGTTACAC
TATTCACCGAGTGCTCATCAAATAGATACATTGTGGTTATAAATCACAATCTACTTATAA
ACATCATATTACAGATGCCTATGAGACAGAAAAATGAACTGTTAGAAATTGGAAAAGAAA
CTTAAAAGCTTTCGGAAAAGAAGTTTGAATTGAATAAACTGGAGTTTCAGGTTTATGGAG
CCGTTAATCTCAAGAGTTCCAATGATGGTTATCGAAGGAAACCATGAGATCGAACCTCAA
GCAGCAGGGCTCATATTCCAATCGTATTTGACAAGATATTCTGTTCCTTCAAAGGAATCT
GGCTCTAATAGTAACCTTTACTACTCTTTTAATGCCGGAGGAATCCATTTCATCATGCTA
GGAGCTTACGTTGACTATAATCAGACGAGTGCTCAGTATTCTTGGCTTCAGCATGATCTG
GAAAAAGTAGATCGTGGCGTGACTCCTTGGCTGGTGGCTGCATGGCATTCTCCTTGGTAC
AATAGCTATTCATCACACTACCAAGAATTTGAGTGCATGAGGCAGGAAATGGAAGAAATG
CTATATACATATCGCGTTGATATAGTTTTCTCCGGTCATGTACATGCATATGAGCGAATG
AATCGAGTCTACAACTATACTTTGGATCCATGTGGTCCTGTTTACATAACAGTCGGAGAT
GGTGGTAATATTGAGAAAGTTGACGCTGATCATGCAGATGATCCTGGGAAATGTCCTTCA
CCAGGTGACAACATTCCAGAATTTGGAGGTGTATGTCACATGAACTTTAGCAGTGGACCT
GCCAAAGGAAAATTTTGCTGGGATAGACAACCAGAATGGAGTGCATATAGAGAGAGCAGC
TTCGGGCACGGGATACTGGAGATGGTAAATTCAACTCATGCGTTGTGGACTTGGCACCGC
AATCAGGATATTTATCGTGAAAACAGTCATGGTGATCAATTATACATAGTACGACAACCT
CATACTTGCTCTGTTGACTCAAAGGTACCCTTTCATCTACCTCAAAGGTGATTATAAATG
GACATTCTCTTTTTCAACTATGGATTTACTCAAAGGTGATATACTAATAAAGTGAAGTAG
TTATGGAGTCTATTGAACAGTTAGAGTTTGACGGTTAAAATACTCTATTATTACTAGCTA
TGTTGCTCGGACTCTCCAAAACTACTTCTTTCATTCTAAGACTAACTTCAGACAAGATGA
AAGTTTTCTTGCAAATCTGCTTTATGGCCTATATAGGAAACTGTGATCGTTACGTTGCAT
CTGTATCTTCACATGATTCTCTTAAAAAAGATAAAAGAGAGACAATGATCTAAATGATTA
ACTATCAGTTCTCCACCATGTAACCAACCATCTATAGCTAGCTCTATTTTTTGCGTTTAT
CATATCTTTAGTACACAAGTCTGAAATCTCAATCATCAAGTTGTTGCTGTGTCATAGTAG
TGACTAGAACAATGTGTTTCTTCTACTTTTCTTTGTAAAATCTCTTTAAGGACTTTCAGT
CCAGTTAGTAACTGTTGTTGCAACCATCTATAGCTAGCTTTATTTTTCGCGATATCATAT
CTTTAGTCACAAATCTCTTGTTGTTGTCTCTCTTTCTTGTTCTAACAACTGTGTTATTGC
ATTGATACTGAAGACAGGATAGCAGGTTGAGTCCATCAATACCAGTGGCGTTGGAACATT
GAAGCTGCACGAGTATCCTATTTGTTACATAATTTTCCTCATTGGCAACCATTGAGTACT
CAATTGGACACACCTTTGTAATGTGTTTATTTTTAAATATCTAGGACACACCTACAATAT
GTGTAATGTTGTTTATAACAATAGGTAAATCACAAATGCCCGTCTAGCTCAGTTGGTAGA
GCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTTAAACATAT
CAATTTTTTGTTGGAGTATCCCAATGGTGTAACGCCGTCGACTTCTTGGGAAAAAGGAGG
AAGATGACTTTAATCTCTTGTTTCGGAGAAATAAGTGGCTCACGAGGAATGGAAAGAAAC
ATATATTTCAATCCCATGTAATACCGTAGTGGCTAAAACAATTCACGTTTCTCATGAATC
AGTATTTCCTATAGATACTCGACTCACGTAAAAACATATCAAAATTAGCTATAACTGAAG
AGTGAAACTATGAAATCATGAACATACTCCATGATATTCATGCTTTAATAATCCTTGAGA
AAACCTTGTCATAAATTTTATAGCATGTCTAGATTACTATATTGTTCTTTATATCAAAAA
AATACCCAAGTTTGTAGGGAGCTGTATTTAAATTGAGCAATTTATTTAATTGTTATTAAA
AAAATATGCACATTATATTGTAACACCGTCTC