Microarray Probes on PGSC0003DMT400079878
Probe ID | Chip | Probe Sequence |
---|
CUST_36365_PI426222305 |
JHI_St_60k_v1 |
CGCGGTTTGTATGATCCAATGGCAGCTACTTGTACTATAATACAAGTAAAAATAGTAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079878
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079878 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G17670.1 |
+1 |
2e-112 |
339 |
193/283 (68%) |
alpha/beta-Hydrolases superfamily protein | chr5:5821082-5822600 FORWARD LENGTH=309 |
Transcript Sequence (1523 bp)
>PGSC0003DMT400079878 1523 pgsc_dm_v3.4
GTTTTAGTGGTCTTACAGTCGAGTCGTGCTTATGCCATTGCAAGTTTGGTGTTATTTTCT
GTGGAACACAAAGTTAAACTCAGATTATACAAGTGTAGCATATTTTTATGACAGACAAAG
CAAGAAAGAGTCGTGGAAATATGAGCACCACAAATAAAATAGAATAGTTAGTTAAAGTTT
GTGGGATGGAGAAGGCAAGTGGAGTGGGGGGAAATGGCTATGAGTGTAGTAGCATGGTTG
TCACCATGCACCACTATTTCATCACCAAACAAATTCAGCTGCTGCTCTGCCATTTCTTCT
CAAGCTGAATCTTCCTTCACAACAGCTACTGCAACCGCCATTCGTCCTGCTGTTATTCTT
CCGGGTTTAGGGAACAATTCAAATGACTATGAGAAGCTGGCTCTCATACTGAAAGGATAT
GGAGTACCAACAGCAATAGCAAAAGTTTCAAGAATTGATTGGCTTAGGAATGCTGCTGGT
TTGTTGGACACAAATTATTGGCGTGGCACTCTCCAGCCTCGACCAGTGCTTGACTGGTAC
CTCAAAAGAATTGATGAAGCCGTCAGTGAAGCAAAAGAATTGGCTCAAGGTGGGAGTGGA
TCTTTATCTATTATTGGGCATTCAGCTGGAGGGTGGCTCGCACGTGTCTATTTGCAGGAA
TTCGGCTCCTCAGACATTTCCTTGTTACTGACTCTAGGAACCCCCCACCTGCCACCACCT
AAAGGTTTGCCAGGTGTAATTGATCAGACAAGAGGCCTGTTGTATTACGTTGAAAAGAAT
TGCGCAAAAGCTGTCTATTCTCCAGAACTTAGATATGTATGTATAGCAGGGAGGTATATT
CAAGGGTCGCGTTTCTTTGATTCAAGTTCAACACACAGCTCTGAATTCGTGGACGGTGCT
GAACAGCCAATGTCAGAGGTTGCTGCTGTAAGCAACACAAATGCAGAGATTGAAACAGGC
TCCACTTTTCGTACACGGTTTGTTGGTCAAGGCTACAAGCAGGTTTGTGGCCAGGCAGAT
GTCTGGGGTGATGGAGTTGTACCAGAAGTTTCAGCCCATCTGAAAGGTGCACTTAATGTC
ACTCTGGAAGGAGTTTACCATTCACCTGTTGGTTCTGATGATGCTACAAGACCATGGTAT
GGTTCTCCTGCTGTTGTCGAACAATGGATTCGACACCTGCTTGTCTGACTGTATAGTTTA
AAAGACAGCCTGGTGAAAGCATTCCTCATTAGCAAGATCTGGGGAAGGGCGACTGTGTAA
TTCCATGGTAAATATTGGGCAAATTTGCCTTATTCTTTGTGGCAAATGGAGAACATTGTT
CATAAAAATGTCACATCTGAGCCAATTAATGAAATCTTCTTCATGAGTATTATGAGATCC
CCTATGCTCATTGTTTTGTCTCTCATTCTTAATCAGGACTAGGATTTAAGGACTCGCATT
CCAGATTTTTGCGCGGTTTGTATGATCCAATGGCAGCTACTTGTACTATAATACAAGTAA
AAATAGTAATGAAGCTGGAAAAG