Microarray Probes on PGSC0003DMT400079633
Probe ID | Chip | Probe Sequence |
---|
CUST_18628_PI426222305 |
JHI_St_60k_v1 |
GCCTTGTTTGAGTGTACCAACTTCAACAACTTCTTGAATTTGAAGCATTCAAGTAATTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079633
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079633 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G51670.1 |
+2 |
7e-152 |
449 |
254/479 (53%) |
Protein of unknown function (DUF668) | chr5:20993560-20995096 FORWARD LENGTH=474 |
Transcript Sequence (1728 bp)
>PGSC0003DMT400079633 1728 pgsc_dm_v3.4
ATCTAATCCTCTCTCTCTCTCTGTTTCTTTCTCTTTGTTTTTCTCTCAACTTTTTTCTCA
TTAAACTCATCAATCAATCTTCTTCTTCTTTACTCAAAAACTCAATTTACATTATTCGAT
TCTCAAATTCTAAATCATGGCGCTGGAAACATGGTTGAATAAGGTGAAAAAAACGATAGC
ACACAGCTTTGTTACAGTAAGATCAGCCGGTGCGCCACGTGCAAAGACGGCGGTGATCAA
GAAATCCAGTGTTGGGGTTTTAGCATTTGAGATCTCTGGGTTGATGTCAAAGCTACTCCA
TTTATGGCAATTTTTATCTGAGAAAAATATGATAAGAATTCGTAATGAGTCGATATGCCT
AGAAGGTGTTCGTAAAATTGTCTCAAACGATGATGCTTTTCTTATAGGCCTTGCTTGTGC
GGAGATTGTGGAGAATTTAAGGATGGTTGCGAAATCTTTGTCAAGAATCAGCAAGAGATG
TGAAGATTCACATCTCAGAAGCTTTGATCGATTCTTTACTGAATTCGCAAATATGGGTCG
TGATCCTTATAATTGGGTTCTTAGTTTGAAGGATATGGAGTTAAAAATCAAGAAAATGGA
TCAGTTTGTCACTACAACTGCCCTGCTTCATCGACAAATGGATGAGCTTTCAGTACTTGA
GAATAGTTTAAAGAAAGCTTCGAATTCAAGTTCCCATTTCAAAGATTCTGACATTTCAAT
CAAAGAACAGAAGATACTTGAGCTACGACAGAAGTATCTGTGGCAGAAACAAGAAGTTAA
GTATCTAAAAGAGCGATCTTTATGGTGTCGTAGCTTTGATACAGTTACATCATTGTTGGC
TCGATCCATTTTCACTACACTAGCAAGGATCAAGCTTGTTTTTGGTATCAATCATGGATA
TCCAAATTCACTCCCACGTAGTCTCTCTGCTTCAGCCACTGTTTATCCTTCAGAAAATCA
TAACACATGCAATTTCGTCTCCGGGCCATTGATGAACAATCCCCCTATACTGAAAGTCTC
AGATCATGAATTTTTCGAGTCAAATACTAAGGTACTTAAACCACCTACGAGTACTTTAGG
CGCGGCTGCACTTGCTCTACATTATGCTAATTTGATCATTGTTATGGAAAAAATGATAAG
ATCACCTCAACTAGTTGGGGTTGATGCTAGAGATGATTTATACTCCATGTTACCAAATAG
CGTTCGATCATCATTAAGATCAAGACTAAAAGGAGTTGGATTTTCGGCTAGTGATCCAGT
TCTTGCTGGTGAATGGAAAGATGCCCTACAAAAGATTTTAGGATGGTTGTCACCTTTGGC
ACATAACATGATCAAATGGCAAAGTGAAAGGAGCTTTGAACAACAAAATTTAGTTCCAAA
AACTAATGTTCTCTTGCTGCAGACTTTGTATTTTGCAAATCAAGAAAAGACTGAAGCTGC
CATAACAGAGCTGTTAGTTGGTCTAAACTATATTTGGAGGTTTGAAAGAGAAATGAATGC
TAAGGCCTTGTTTGAGTGTACCAACTTCAACAACTTCTTGAATTTGAAGCATTCAAGTAA
TTAGTCTTTTCTTGTTTGTTCTAAGTTTTTTTTTTTATTCTTCTTTGTTCTAATTAATAG
ATATATAATTTGAGGATTGTTAGATGTAAGGTCTGTTTTGTTTTAACACAAATCTGTATA
TTGTATCATATCAATTGTAGACTATTACTATAAGATTTGAGTCAAGAT