Microarray Probes on PGSC0003DMT400079559
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47041_PI426222305 |
JHI_St_60k_v1 |
GTAGCCCCTATGTTCACTTTTATTCATCCACAAAGGATTTTGCACTCTTTGTAAGAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079559
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079559 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G70370.1 |
+2 |
0.0 |
696 |
339/599 (57%) |
polygalacturonase 2 | chr1:26513003-26514998 REVERSE LENGTH=626 |
Transcript Sequence (2090 bp)
>PGSC0003DMT400079559 2090 pgsc_dm_v3.4
TCACACTCTCTCTTTTCACACTAAAGCAATGCATACCAAAACTTTTCTTTCTTCATGCAT
CCTACTTGTTCTTTTGTTCTCACTTTCATCTTTCAATGTTGTTGTGGCTAGAAATGGAGA
CAAATCCGGGAACCCATTTACGCCAAAAGGTTATCTGATTAGATACTGGAGTAAACATGT
GTCAAATGACTTACCAAAGCCATGGTTCCTTCTCAACAAGGCATCTCCATTGAGTGCTGC
TCAATATGCAACTTACTCAAAACTTGTTACTGATCAAAATGCACTGACCACACAACTTCA
ATCCTTTTGCTCTTCAGCAAATCTCATGTGCGCACCAGATTTGTCACCAAGTCTCGAAAA
ACACACAGGAGATATCCACTTTGCCTCTTACGGTGACAAGAACTTTACCAATTACGGCAC
CAAAGAATCTGGTGTCGGATTCAACTCCTTCAAGAACTATTCTGATGAAGGAAATTTCCC
TGTGAATTCTTTCAGGCGCTACAGTAGAGATTCTCCCCATGATAATCAATTTGACAACTA
TGCCCCTGATGGCAATGTACCTGACCAAAGTTTCAACAGCTATAGCAAAAATACTCCAGG
GGGCTCTGGCCAATTCAATAATTACGACCCAAATAGCAATGTTGCCAATATGGGGTTCAA
TTCCTATGCTGACAATGGAGCTGGTTCGGTCCAAAAATTCACAAATTACGCCCCAAGTGG
GTCTAATATCCCTAATATGCACTTCACTTCTTATTCCGACCACGGAACGGGAGGGGAAGA
AGAATTCAAATCCTACTCAGACGATGCAAATGGTGGAGTCCAATCTTTCAAAAACTATGG
CAAAGATGGGAATGGTCCTAATGGTAAATTCATCGAGTATGGAAACAAAGCCAATGATCC
TCAAAACAATTTCAACAACTATGGCGTTGAAGGTAATGGTATATCTGAGACTTTTACTAA
CTACAGAGATCAATCAACTCTTGGCGATGACAAGTTCACCGTCTATGTTAAGGACGCAAA
TGGTGGTGAAGCAAATTTCACCAACTATGGTCAATCTACCGATGAATTTGATAACGGTAC
TGATGAATTCACTACCTATGGCGAAGGGGGTAATGACCCACATATTAATTTCAAAACTTA
CGGAGTTAACAACAACTTCAAAGGTTATGTCAAAGACACTGCCACATTTTCCAATTACCG
AAAGAAAACTCCCCAAGTTTCGGCTTCATTGACCGGTGGCAAAAAGGTGAATAACCGGTG
GGTTGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTGAAGAGTGGTACAATCATGCCTAT
GCCAGATATTAAGGATAAGATGCCTAAAAGGTCATTTTTGCCCCGGGTGATTGCTGCGAA
ATTACCCTTTTCTACCTCAAAGATTGATGAGCTGAAGAAAATCTTCCATGCCGCCAATGA
TTCTCAGGTGGCAAAGATTATCGGCGATGCTCTCAGTGAATGTGAAAGAGCACCGAGCGC
CGGCGAGACGAAACGGTGTGCTAAGTCAGCTGAAGATATGATTGATTTCGCAACATCAGT
ATTGGGTCGAAATGTGGTGGTTCGAACGACTGAGAATACAAAAGGATCAAATGGGAATAT
CATGATAGGAGCAGTCAAAGGAATCAACGGTGGAAAAGTTACAAAATCAGTATCATGTCA
CCAGACCTTGTTCCCTTACTTACTGTATTACTGTCATTCGGTTCCTAAAGTCCGGGTCTA
TGAAGCGGATATTTTGGACCCGAATTCAAAGGCTAATATCAATCACGGTGTTGCCATTTG
CCACGTGGATACTTCTTTATGGGGACCCAAGCACGGAGCCTTCATTGCACTCGGGTCGGG
ACCCGGGAAAATAGAGGTTTGTCACTGGATCTTTGAGAATGACATGACTTGGGCAACTGC
AGATTGAGCCAAGGAGTAAAACTTGGTTTTAATAAATATTCAAAGTTTCTATTGTTCTCT
CTATATTTGGGCAAAGTAATGTAGCCCCTATGTTCACTTTTATTCATCCACAAAGGATTT
TGCACTCTTTGTAAGAAATAAATAAAATAAATAAGATGCATATTTTAATT
