Microarray Probes on PGSC0003DMT400079558
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47027_PI426222305 |
JHI_St_60k_v1 |
GTAGCCCCTATGTTCACTTTTATTCATCCACAAAGGATTTTGCACTCTTTGTAAGAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079558
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079558 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G70370.1 |
+3 |
0.0 |
696 |
339/599 (57%) |
polygalacturonase 2 | chr1:26513003-26514998 REVERSE LENGTH=626 |
Transcript Sequence (2088 bp)
>PGSC0003DMT400079558 2088 pgsc_dm_v3.4
ACACTCTCTCTTTTCACACTAAAGCAATGCATACCAAAACTTTTCTTTCTTCATGCATCG
TACTTTTTCTTTTGTTCTCACTTTCATCTTTCAATGTTGTTGTGGCTAGAAATGGAGACA
AATCCGGGAACCCATTTACGCCAAAAGGTTATCTGATTAGATACTGGAGTAAACATGTGT
CAAATGACTTACCAAAGCCATGGTTCCTTCTCAACAAGGCATCTCCATTGAGTGCTGCTC
AATATGCAACTTACTCAAAACTTGTTACTGATCAAAATGCACTGACCACACAACTTCAAT
CCTTTTGCTCTTCAGCAAATCTCATGTGCGCACCAGATTTGTCACCAAGTCTCGAAAAAC
ACACAGGAGATATCCACTTTGCCTCTTACGGTGACAAGAACTTTACCAATTACGGCACCA
AAGAATCTGGTGTCGGATTCAACTCCTTCAAGAACTATTCTGATGAAGGAAATTTCCCTG
TGAATTCTTTCAGGCGCTACAGTAGAGATTCTCCCCATGATAATCAATTTGACAACTATG
CCCCTGATGGCAATGTACCTGACCAAAGTTTCAACAGCTATAGCAAAAATACTCCAGGGG
GCTCTGGCCAATTCAATAATTACGACCCAAATAGCAATGTTGCCAATATGGGGTTCAATT
CCTATGCTGACAATGGAGCTGGTTCGGTCCAAAAATTCACAAATTACGCCCCAAGTGGGT
CTAATATCCCTAATATGCACTTCACTTCTTATTCCGACCACGGAACGGGAGGGGAAGAAG
AATTCAAATCCTACTCAGACGATGCAAATGGTGGAGTCCAATCTTTCAAAAACTATGGCA
AAGATGGGAATGGTCCTAATGGTAAATTCATCGAGTATGGAAACAAAGCCAATGATCCTC
AAAACAATTTCAACAACTATGGCGTTGAAGGTAATGGTATATCTGAGACTTTTACTAACT
ACAGAGATCAATCAACTCTTGGCGATGACAAGTTCACCGTCTATGTTAAGGACGCAAATG
GTGGTGAAGCAAATTTCACCAACTATGGTCAATCTACCGATGAATTTGATAACGGTACTG
ATGAATTCACTACCTATGGCGAAGGGGGTAATGACCCACATATTAATTTCAAAACTTACG
GAGTTAACAACAACTTCAAAGGTTATGTCAAAGACACTGCCACATTTTCCAATTACCGAA
AGAAAACTCCCCAAGTTTCGGCTTCATTGACCGGTGGCAAAAAGGTGAATAACCGGTGGG
TTGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTGAAGAGTGGTACAATCATGCCTATGC
CAGATATTAAGGATAAGATGCCTAAAAGGTCATTTTTGCCCCGGGTGATTGCTGCGAAAT
TACCCTTTTCTACCTCAAAGATTGATGAGCTGAAGAAAATCTTCCATGCCGCCAATGATT
CTCAGGTGGCAAAGATTATCGGCGATGCTCTCAGTGAATGTGAAAGAGCACCGAGCGCCG
GCGAGACGAAACGGTGTGCTAAGTCAGCTGAAGATATGATTGATTTCGCAACATCAGTAT
TGGGTCGAAATGTGGTGGTTCGAACGACTGAGAATACAAAAGGATCAAATGGGAATATCA
TGATAGGAGCAGTCAAAGGAATCAACGGTGGAAAAGTTACAAAATCAGTATCATGTCACC
AGACCTTGTTCCCTTACTTACTGTATTACTGTCATTCGGTTCCTAAAGTCCGGGTCTATG
AAGCGGATATTTTGGACCCGAATTCAAAGGCTAATATCAATCACGGTGTTGCCATTTGCC
ACGTGGATACTTCTTTATGGGGACCCAAGCACGGAGCCTTCATTGCACTCGGGTCGGGAC
CCGGGAAAATAGAGGTTTGTCACTGGATCTTTGAGAATGACATGACTTGGGCAACTGCAG
ATTGAGCCAAGGAGTAAAACTTGGTTTTAATAAATATTCAAAGTTTCTATTGTTCTCTCT
ATATTTGGGCAAAGTAATGTAGCCCCTATGTTCACTTTTATTCATCCACAAAGGATTTTG
CACTCTTTGTAAGAAATAAATAAAATAAATAAGATGCATATTTTAATT
