Microarray Probes on PGSC0003DMT400079161
Probe ID | Chip | Probe Sequence |
---|
CUST_42492_PI426222305 |
JHI_St_60k_v1 |
ATGTAATGAGAGTTTGGTGAGACTAAGCAATAAAGCAAGGAAGTTACTCTTATATCTGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079161
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079161 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G22410.1 |
+1 |
0.0 |
821 |
398/449 (89%) |
Class-II DAHP synthetase family protein | chr1:7912120-7914742 FORWARD LENGTH=527 |
Transcript Sequence (1933 bp)
>PGSC0003DMT400079161 1933 pgsc_dm_v3.4
TCAGGTACCCATCCATCTCTCTCTCCATAACAAAAGAGGTGCCCAAAAAGAGAAAATTAC
ACTTCATAAACTCTCACATTTGTGTTTCTTCACAAAATAGCAATGGCTCTTTCAAGTACT
AGCACTACCAACTCTCTTCTTTCCAACAAATCTTTGGTTCAAAATCAACCCCTTTTGCCT
TCTCCTTTAAAGAATGCATTTTTCTCCAACAACTCAACCAAAACCATTAGATTTGTTCAA
CCTATCTCAGCTGTTCATTCATCTGATTCTAACAAAAACCCCATTGTTTCCGATAAGCCC
TCCAAGTCTTCTCCACCGGCGGCCACTGCCACCACGGCTCCGGCTCCGGCTGTGACCAAA
ACTGAATGGGCTGTGGATAGCTGGAAATCTAAGAAGGCGCTTCAACTACCGGAATACCCA
AATCAAGAGGAGCTTAGATCTGTTCTTAAGACGATCGATGAGTTCCCTCCTATCGTCTTT
GCTGGTGAGGCTAGGAGCCTTGAAGAACGCCTTGGTGAGGCTGCTATGGGAAGGGCGTTT
TTGTTACAAGGAGGAGATTGTGCTGAGAGTTTCAAGGAATTCAATGCTAATAATATTAGG
GATACTTTCAGAATCCTCCTTCAAATGGGTGCTGTTCTTATGTTTGGCGGTCAGATGCCT
GTGATCAAGGTTGGAAGAATGGCTGGGCAATTTGCAAAGCCAAGATCAGATTCATTTGAG
GAGAAGGATGGTGTAAAGCTGCCGAGTTACAGGGGAGACAATGTCAACGGAGATGCATTT
GATGTCAAGTCCAGGACTCCTGACCCCCAGAGGCTGATCAGGGCCTATTGCCAATCTGCA
GCTACTTTGAATCTGTTGAGGGCTTTCGCTACTGGAGGATATGCTGCCATGCAGAGGATC
AATCAGTGGAACTTGGATTTCACAGAGCATAGTGAGCAGGGTGATAGGTACCGTGAACTA
GCTAGTAGAGTGGATGAGGCCCTTGGTTTCATGACTGCAGCTGGACTTACAATGGACCAT
CCTATTATGAAAACCACTGAGTTCTGGACATCTCATGAGTGCTTACTCTTGCCCTATGAG
CAGTCACTAACACGTCGGGATTCAACTTCTGGCCTTTACTATGATTGCTCTGCTCATTTC
CTTTGGGTTGGAGAGAGAACCAGGCAGTTGGATGGTGCCCATGTTGAGTTCTTGAGAGGA
ATTGCCAACCCTCTCGGTATTAAGGTGAGTGACAAGATGGACCCAAGTGCATTGGTCAAG
CTCATTGAGATTTTGAACCCACAAAACAAAGCTGGAAGGATTACAATAATTACCAGAATG
GGAGCAGAAAACATGAGGGTTAAACTTCCTCATCTTATCAGGGCAGTCCGAAGTGCAGGA
CAAATTGTGACTTGGGTATCTGATCCTATGCACGGAAATACCATCAAGGCTCCTTGTGGT
CTAAAAACTCGACCTTTTGATTCCATCAGGGCCGAGGTAAGAGCATTCTTTGATGTTCAT
GATCAAGAAGGAAGCCACCCAGGAGGAGTTCATCTGGAGATGACAGGCCAAAACGTCACA
GAGTGCATTGGTGGATCACGAACTGTGACCTTTGATGATCTGAGCTCACGTTACCACACC
CACTGTGATCCTAGGCTCAATGCATCTCAATCCCTTGAGCTCTCGTTCATTATCGCAGAA
CGTTTGAGGAAAAGGAGGCTCGGATCGCAAAGCGTTTTAGGGCAATAGATATTTGGAAAT
GTTCAAGTACTGCCTTTTTCTATTTACTTCTTCACTTATATTATGAATGTTTGTATTAAA
AATTGTATTTTCTTAAATCCTATTTGGAGGATATATGTTATGTTTGCGCTACGTGCATAC
TGAAATTGTTTTAATGTAATGAGAGTTTGGTGAGACTAAGCAATAAAGCAAGGAAGTTAC
TCTTATATCTGTC