Microarray Probes on PGSC0003DMT400079094
Probe ID | Chip | Probe Sequence |
---|
CUST_32412_PI426222305 |
JHI_St_60k_v1 |
TGGCGGCGATGAACATTATTCTCAACAATCCTTCCTCTGGAACTTTTAACTTAAACTCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079094
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079094 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G19210.1 |
+1 |
7e-42 |
145 |
74/127 (58%) |
Integrase-type DNA-binding superfamily protein | chr1:6626973-6627530 REVERSE LENGTH=185 |
Transcript Sequence (890 bp)
>PGSC0003DMT400079094 890 pgsc_dm_v3.4
CCCTCCAATGGTCTTTTCGATTATAATTATCTCTTTCATCTGCAGGGTCCACTCTCATCA
TAATAGTAATCTATTACTACCTCTAAATCATCCATGGAAGCCAACCCTACTCATGATCAG
CCAAAGTTCAAAGGAGTTCGGTTGAGAAAATGGGGGAAATGGGTTTCTGAAGTCAGATTG
CCTAATAGCCGCGACAGGATTTGGTTGGGCTCATACGATTCTGCTGAGAAAGCCGCAAGG
GCTTTTGATGCTGCACAGTTCTGCCTCCGCGGGCCGAAAGCTAAGTTTAATTTCCCTGAT
AGTCCGCCGGATATATCCGGTGGACAAAGGCTTTCCCCCGCAGAGATACAGGCTGTAGCA
GCTAGATTTGCGAATGATTACTCGCCGTCAGTGGTACAGGAGATACAGCGTGATGACCAT
GAGGGCAATATTGGAAATATTAATTCACACGTGATAAATATGGAAAAAGATGAGATTTCG
CTATCAACAACTAGTAGTTGTGATGTACCACCTATGGTGGTCCAAATGGGCACTAGTACT
GTTGCTGAAATGGACTGGGCTTTTTATAATGATATGATGGAAAATTATCCATATAATGCA
AGTGGGCCTCCACCTGAATTTTTTTGTGATCCATATTATCCCGGAGCAGGAATAGGAGCA
GGAGCAGGAGCAGGAGGAGGAGGAGTACTCGATATTAATTTATCAAGTAATCTCTACTCA
CCACCACATTTTCCGCAAAGAACAACTCCTAATTATGACGATGATGATACTGGCAATGGC
GGCGATGAACATTATTCTCAACAATCCTTCCTCTGGAACTTTTAACTTAAACTCAATATA
TACTAGTACTAATTGGTTAATTAACCAGCAGCATATTGGTATATATATAT