Microarray Probes on PGSC0003DMT400078399
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11258_PI426222305 |
JHI_St_60k_v1 |
GGATTTACTTGCTTGGTTCTCGTTAAACTGAGTGTTAATGGTCGACGATGAAAATTAAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078399
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078399 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G15100.1 |
+3 |
2e-41 |
141 |
79/169 (47%) |
RING-H2 finger A2A | chr1:5193703-5194170 REVERSE LENGTH=155 |
Transcript Sequence (724 bp)
>PGSC0003DMT400078399 724 pgsc_dm_v3.4
GAAAAAAGTGTCAAGCAAATTCTAAAACCATAATAATAGTATTATCCCAAAATATGGGAT
TACAAAACCAGCTTAGTGACATTTCTACTGAATCAATTCCAATATTAATGATAACCCTTT
TTGCTAATTCTCTTAATTATCTCCGTTCCTTAATCTACACTTTCCTTCAATTTCTTGGCA
TCTCTTCTTCCCGATTTACCCCTCATCAAATCGACGATTCGTTCTGCGAAGCGGTCGGGT
CCGGTTTAACCGGCGTTATTTTCCTCGCCGATCAGCTTAATCTGAACCGGTTGTTATCTT
ATCATCATCAACAGCAACAGGATGAAAAAACCGGTTCCGGTTCAAGTACCTGTGTGGTTT
GCTTGAACCGGTTGGGTGATGGAGACCGGGTTCGCAAGTTAGCCTGCCGGCACGTGTTTC
ACATGGAGTGTTTAGATGGGTGGTTCAATACGCTAAATTTCAACTGTCCACTTTGCCGGT
CGACTTCGGTCTCCGGTGAGCGCGTGGTGAGAGCGCGGCGGCGCGTTGCTGGGGATTTAC
TTGCTTGGTTCTCGTTAAACTGAGTGTTAATGGTCGACGATGAAAATTAAACTTTTTTTC
TTTCTTTTTTTTATTTTTCTTTTCACTTTTGTGGGATTACTTTTAGTATTTTTTTTTTAG
GAAATTAATATTTTTTTCCTTTTTGTTTTGTTTTTGAAGGGCATTGATAAGAAGCTCTTT
TGTA
