Microarray Probes on PGSC0003DMT400078286
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22702_PI426222305 |
JHI_St_60k_v1 |
GGAAGAATCATGTATGCACTTTCAGTTTGGGAGCCTATTCATAAATAAAATCTTGCATTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078286
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078286 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G37650.1 |
+3 |
7e-152 |
462 |
240/417 (58%) |
GRAS family transcription factor | chr2:15792623-15794779 FORWARD LENGTH=718 |
Transcript Sequence (2157 bp)
>PGSC0003DMT400078286 2157 pgsc_dm_v3.4
AATATTCTTAAATATTTAGTTTAAGTAATATATATGTGTCTTCATCAAGAATCAACATCC
ATTTCACAATCCCTCAAAAAAACATTTTTTCTATGATGAATACTGGCTCCCATTTCCCAG
GTGATCATAGATCATCTGATGGATTTGAATTCTGTCATCGCTTTGGTGGCGGTGGCGGTG
GAGGAGGAGGAGTTAACGATGTTCTCTGTTTTTCGAGCAGACGACCATCGGAGGAGGAGG
TTGTTATTGGAAGTGGTAGTGATCGTACAGTAGTCCAAGGAGATTACTTCGATGGAGTTT
TTAAGTATATACATCAGATGCTTATGGAAGATCAAGAAGATTTGGAAAATAGGCCATGTA
TGTTTCAAGATTGCATAGCTCTCCAAGCAGCTGAAAAATCGTTTTATGATGCGTTGAATC
CACCTCCAATTCATCACGATTTCGTTGATGATAGTGGTAATCAATTTCAAGATGATTACT
GCGATGCTGTGAATCAATTTGTTGAGACAACTTTCAATTCTGATTTAGATGCTGACCAAT
GTTCCCTTTTTTATAATACTAATATCTGTCAAGGTGTTGGTGATGGTATTAGTGTTGTCA
ATGGCGGTGCATCGAATGCAATCAATTATCATCAAGTCAATGATGTCAATCAAGGTGGGA
TACCAAGTTCAGATGGAAACAAAAAGCATACTCGAGATGAAAATAATGACAGTTCAAAAG
GGCGAAAATCGAAGCAGTTAGCTAGTAATGGAACAGAGGAAACAGAGGATGGAAAAACAG
AGGAGCACTACGATAAAGCGCTTCTCTGTCCAGGCTTGAATCCTTCCTTCTATGAAAATC
GATCAAAATCAGCAACAGCATCAGATAATGCAGCATGGGATAAACAAAAGAGCTCTCATA
TAAAGCAGTCTAAACGTGGAAGGCCTCGTGGGAGCAAAAAAGGCGTTAAGACGAATGAAG
TAGTAGATCTTACTAGCCTCCTAACGCGTTGCGCGGAGGCTGCAGCAAGCTACAACAGCA
AAACATTCATAGAGGTTCTCAAGAAAATTAGGGAGCATTCTTCTCCTTTTGGTGACGCTA
CTTCAAGGCTCGCCTATTGCTTCGCCAATGCCCTAGAAGCTCGTTTTGCTGGCGGAGATG
CAACATTGATCACAAGTAAGAAAATATCATCTGCAGATTTCTTAAAAGCTTATCAGGTCT
ACATCACTGCTTGTCCATTCAAGAGGATGTCAAACATATTCGCAAACAAGTCTATCGCGA
AGCTAACAAGTGAATCATCGAGGATTCATATAATAGATTTTGGTATTCTATATGGATTTC
AATGGCCTTGTATAATACATGGGATTTCCCTAAGGCCCGGGGGACCTCCAAAGCTTAAGA
TCACAGGAATCGATTTCCCTCAGCCAGGTTTTCGACCAGCTGAGAGAGTTGAGGAGACAG
GACGACGTTTAAAAGACTATTGCAAGAGATTTGATGTTCCATTTGAGTATAAAGCAATAG
CTAAGAAATGGGATGAGATTACACTAGAAGATTTGGACATTGACAGAGATGAAATCGTCG
TGGTGAATTGTTTGTACAGGCTAAAGAATGTCCCTGATGAAACAGTAGTAACACACAACA
ACAAAAATCCAAGAGATGCTGTTCTCAACTTGATAAAGGAAATAAATCCTCATTACTTTG
TCCATGGGATCGTTAACGCTATGTACAATGCATCTTTCTTCACTACAAGATTCCGAGAGG
CTTTATTCCATTTCTCGTCCCAATTTGACATGTTTGAGGCCACAATGCCACGAGAAGATG
AAGGAAGGATGACGTTTGAGCAGGAAGTATTCGGAAGAGATATAATGAACGTTATAGCTA
GTGAAGGGGCGGAGAGAGTTGAGAGGCCGGAAAGTTTCAAGAAATGGTCAATGAGGAATC
AGATAGCGGGGTTTAGACAACTTCCATTGGATCAAGACATCGTCAAGGAAGTAAAAACCA
AGGTGAAAATGTTCTATCACGCGGATTTTCTAGTCGATGAAGATAGCAATTGGATGTTGC
AAGGCTGGAAAGGAAGAATCATGTATGCACTTTCAGTTTGGGAGCCTATTCATAAATAAA
ATCTTGCATTCAATTCTTGTAAAACCATAAATCAATGGAAATTCGACAAATGACAAA
