Microarray Probes on PGSC0003DMT400078219
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22566_PI426222305 |
JHI_St_60k_v1 |
AGGTGACATTTTTTGGATATTGATGCAATGTATTGAGGTCTGATAGGATCGCACAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078219
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078219 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G04110.1 |
+2 |
1e-25 |
111 |
70/196 (36%) |
DNA GYRASE B3 | chr5:1110757-1114112 REVERSE LENGTH=546 |
Transcript Sequence (2187 bp)
>PGSC0003DMT400078219 2187 pgsc_dm_v3.4
GAAAAAGTTCAGTTTTTTCTTTCGTTCAATTTTTCGGCCTGAAAAATTGAATCGCGCAGT
AGCTCAAGAACAGTAAAGAGTCTGAATCTGAGTAGATTTCAGAGAAAACTTGAAAAGATT
GAATTTGGGCAAGATTTCGAAGAACGCGATAAGGAATTAGGGTTTAAATCTTCATTTTTG
CGCCTTCGAGAAAATAAAAACGACGATTTTAATGAATCAGAGACGTAATTATCTGAAATT
CTTCTGGAAATTTGATAATTTTCGTAATGATCGGCGAATTACAACATCATAACTTGTTTT
CTGACAAGAAGATCAAGTAATATGTATCTTAATTTATTTCGTTGAATTTTTCATGCTTAG
AATTCGAAATTTTATATTGCCGCTGCTCCCCTGTTCTTCAATTCTAGCTTCAATGGAGGC
GACGGAAGAGCTGAGATCAGTGGCTTTTGATTGAGTTAAGAGAAGAATCAAGAGCCCTTT
ATAAAGATTCTAAAGTGTCTCTTCGTGACTGGAAAAGGGTTGCCGATAAATAAAGACTAT
TAATCCTTCTTCTACATTCATATATGTGAATCTGTGATGTATGTTTCTTCTACGTGTATG
TATTTAATATACATAGATATTCATATCTAATAATGTATATATGTATTGTTATACCATTAG
TTGTCTATATACATTGCGTGTGCATCAATCTCCTGAAAGTCTAAGTACATGTGTAGGAGA
TATGCATAAATGCATTCATATAGTCATGAGTCATGACTGTCGAATTTTGCTAACAGATAA
TCAGAAGATTTTCAAAGTAGTTGCATTAAGCTTACTGTGTTTTCTTGACATTTGAGGAGA
AGGGGTCTTAGATCTGGTTCCTGATGAGACTTGTGCTGATTAAACTATTGCTCTTTGTAT
CCAGTCTTACTCATTCGTCTGTTTAACTTCTCATTTTTGGCATATAGAGAAGGGCTGCAT
AAGTTGCTGCTGACGGAGCTTGTACTGCTGTCAAACGGGGAACTTGGATAACCCTTTCAC
TCGACCAAAAGCTTTCATTCACGCTTGATTCTGCTGCACTAGGTACTAGTATCCTATAAA
ATAGTGATCTCTTTTAAAGAAGTCTTGAGGAACTGTGATATATTCACTAGGAGACAAACT
CATTCACTCTTGTTCTTCCATGTTCTCGTGAAGTATGACGAAAGCAAAAGAGCTACCGGA
TCCAGCCCTGACCAGTGAGAAGAAATTGGTAATCCCAGTAGGACCCAGGTTTCAGGTTGA
TGTTGATGTTCCAGATTGGGCCAACTCTCCGAATAAGGGAACTCCAGTTGTAGCAGCAGA
TAATGCATTAAGAGCTTCTATTCCATCAATGGAGGAAATGGTATGCAAGTATAAAAAGGA
GGAATCTGATACTTCAAAATGGCTTGGTACACTGGTATGGCCAACAGACGACAACCTAGA
AAACAAGGAAGTTAACGAGGCATTGGTTGGGAAAGGGAGAAACGAACATTGTTCTTGTAG
GTCCCCTGGATCTTTCGAGTGTGTTAAAAGACACATTAAAGAAGAAAGCATGAAGTTGAA
GTCTGAACTGGAGACAGCCTTCAATGTCTGGAAGTTTGATGAAATGGGAGGAGAAGTTTC
CCAGTTGTGGAACACTAAGGACCAAAAAAAGTTCAGGTCCCTCGTTAAGACCGGTCTGTC
TAAAGGCAAAAGCTTCATGAAACCAGCATTAGCATCTTTTCCTTCCAAGAATAGGCAAAG
CATTGTCAACTATTACTTCAATGTTCACATTCCTCAGCGTATCAGGTCAAATGGTATAAC
AATTAACACCGATGATGAAGATGAAGAAGAGGAAGAAGATGAGGAAGAGGAGGTCACTGC
TCCCAGACATTCTCGTAAAAGGAATCGAGCAAACAAAGGTGTCTCTACTAGTTCTAAATC
TCTGAAGACAAAGTACCTAAGTGGTCGACGATGACACCAGAAGTATCAATATACATTCTT
TTTTAGTTGTCATAGAAATGGAATATACAGAGAGAAATGTATTTTATCACTCAATCCAGG
GAGAGTTTTGGGATGGGGTTCACATTTTATACATAGGTTTTAAAGTCAAGAAAAGGTGAC
ATTTTTTGGATATTGATGCAATGTATTGAGGTCTGATAGGATCGCACAAAAAAACTATAC
ATAAATACATTGATATCTGGATTTGAG
