Microarray Probes on PGSC0003DMT400078173
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22778_PI426222305 |
JHI_St_60k_v1 |
CTTGACTCCCAATCAAATGTCGTGCCGGAGTTAGGGTAGCGTAACAAGTTTATTCACTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078173
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078173 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G07630.1 |
+2 |
0.0 |
817 |
465/729 (64%) |
pol-like 5 | chr1:2349189-2351437 FORWARD LENGTH=662 |
Transcript Sequence (2697 bp)
>PGSC0003DMT400078173 2697 pgsc_dm_v3.4
CAGCCCCCCCACAACCCAAAAGTCAACGCCCCTCTCTCTCTTCTTCACCTCTTCTTCTTC
TCATTTCTTCAATTTTCTTCTCCACTCTGCAATGAATCTTTAAGCTTTTTTAAGCTTCCC
CTTTTAATTATTTCAATTTTCTGAGTTTTTTTTTTAAATAAATTTTGTTTCCATGGGAAA
CGGTGTAGGAAAGCTTAGTGTTTGTTTCACTAGCGGCGGCGCCGTGGAGGGTCGTCGCCG
GAAAGATTTCCCTCTCATGATTTCTGACCCACTTGAAGATTTGGGTCATTCTTTTTGTTA
TGTTCGACCCGATCAGACACGGATTTCATCTTCCAAAGTTCACTCAGAGGAAACCACAAC
TTTCCGGTCAATCTCCGGCGCCTCTGTTAGTGCCAACACTTCAACGCCGCTCTCCACGGC
GTTTGTCGATCTGTATTCTTACAATAGCATCGATCGGTCTTCGGCTTTTGAGGGTTCTAC
TTCTTTTGCTTCTATACCCCTTCAACCTATTCCCAGAAACTCTTCAATTCACTCCGGCCC
GCTTTTCACTTCGGGCCTTGTTCCGGCTTCGGGCCCGATGGAACGTGGGTTCATGTCCGG
CCCTATTGAGAGGGGATTTCAATCGGGCCCGCTTGATCGTGGTCTTTATTCGGGCCCTCT
TGATAGGGGCTGTTCTGATCAGTTTCAGAGAAGCTATTCACATGGTTTTGCTCTTCGATC
TAGATCAAAAAAAGGGTCATTCTTTCGGGTTCTACAAAGAGCTATATCGAAGACCTTATC
AAGAGGTCAAAATTCTATTGTTGCACCGATTAAAGGGTCAATTTCAGTAAAAGAAGGTGA
TTGGGTTGTGGGTGCTGAAAAGCAGAACGAATTGACTATTAGCAGTGTGAATTTCAGCAG
TGAGTGTAGTTTGGATGATGATGACACTTTAGATAATCAGAATCTTCAGTGGGCTCAAGG
GAAAGCCGGTGAAGATCGTGTTCATGTCGTAGTTTCTGAGGAACATGGTTGGGTTTTTGT
CGGGATTTATGATGGATTCAATGGTCCTGATGCACCTGATTTCTTGGTATCAAATTTGTA
TCCAGCTGTTCACAAAGAGCTCAAAGGACTGTTATGGGATGACAAATTAGATAATAATTC
CTCTGTTACGATCCCATCTCCGAGTTTAGCAGTGGAAGAATCTAATCAGACTATTGACGA
TGAATTCTCAAGGGATAGGCCTATTGATAGTTGTTCAAGATGTGTTGAGCAAGAGAATTA
TCCTTCAGCGAGGGAGGATCTTTCATTCGATTCGCGGTTAAGGAAAAAGAGGGGGAAGGG
TTCAAAGAACAGGTACAGAGGAGTATCAAAGAAATGGGAAGAGAATCAGAGGCGATGGCG
ATGCGAATGGGACAGGGAAAGATTAGAACTTGACAGGAGATTGAAGGAACAGCTGAATGG
AAATGGTTCAAATGGATCAGGATCAGTTAATCATGCTGATGTATTAAAAGCTCTTTCTCA
AGCATTGAAGAAAACAGAGGAGGCATATTTGGATCTAGCTGATAGGATGAATATGGAGAA
TCCTGAATTGGCTTTGATGGGTTCTTGTGTTCTTGTTATGTTAATGAAAGGAGAGGATGT
TTATGTGATGAATGTAGGCGATAGTCGAGCCGTGTTAGCTCAGAAGAAAGAGCCTAATCT
GTGGAGTCAAGATTTGGAAAGGATCAATGAAGAAACATTGAAAGATCTTGAACTTTTCGA
TGGCGATGAGTCGGATTGTGTACCTAATTTAACTGCTTTCCAGCTTAGTATAGATCATAG
CACCTCTGTGGAAGAGGAAGTTCAAAGAATAAAAAGTGAACATCCAGATGATCCATGTGC
CCTGATGAATGACCGTGTTAAAGGTTCATTGAAGGTTACTAGGGCTTTTGGTGCTGGTTT
CCTCAAACAGCCTAAATGGAACAATGCACTTCTTGAGATGTTCAGAATCGACTATATTGG
AACTTCCCCCTACATCAGTTGTCTTCCATCGCTCTATCATCACAGGTTAGGGCCAAGAGA
CAGGTTTTTGATACTGTCATCCGATGGGCTCTATCAGTACTTCACAAACGAAGAAGCTGT
ATTAGAAGTCGAACATTTCATCTCATGGTCACCAGAAGGAGATCCAGCACAACATCTCAT
CGAGACAGTATTGTTTCGTGCTGCAAAAAAAGCTGGTATGGAGTTTCATGAGTTGCTTGA
AATACCACAAGGGGATCGACGTCGATACCATGATGATGTTTCAATAATTGTTATTTCTTT
GGAGGGAAGAATATGGAGATCCAGTGCATAAGTAGGGAAAAAAAATTAAAGAGTTATAGA
CCTATTCAAAAAAAATGAAAATCAAACATCCAATTTTTGTTCTTTCCTAAATCACCATTT
TGTAAATAGCAACTAAGCCTGGAACCAGAATTACTTAGTTGTAAAATGTACTGTGGGTGA
TGGATGGGATTGTAAAGGTGTTAGATCAACTCTTTTATCAGTTTATAAGCTGTCATATTA
GGTGTAATTTCTTTAATAAATGACATCTCTAAGAAGAAACTCTGTTCAAACAAAACTAAT
TGCAGCAGCATGTATCAAACTTCTGAATGTTAGTATTTACGTGCTCTAAACTTCTTGCTT
GACTCCCAATCAAATGTCGTGCCGGAGTTAGGGTAGCGTAACAAGTTTATTCACTAG
