Microarray Probes on PGSC0003DMT400078065
Probe ID | Chip | Probe Sequence |
---|
CUST_22756_PI426222305 |
JHI_St_60k_v1 |
TTGACCTCTGATCATAGGCCTTCAAGGAAAGATGAGAAGGATAGAATTGAGGCATCGGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078065
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078065 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G07160.1 |
+3 |
3e-132 |
393 |
206/320 (64%) |
Protein phosphatase 2C family protein | chr1:2198155-2199678 REVERSE LENGTH=380 |
Transcript Sequence (1553 bp)
>PGSC0003DMT400078065 1553 pgsc_dm_v3.4
CACAAATCCAAAAAAGATATAACGGGAAAAAATTCGAACGTTAAAAGAAAACGACAGATC
GGAAAAAAACCGCCGGAGAAAATATGTCTTGCACCGTCGCTCTTTCAAATTCGCCGGTGT
TCTCACCGTCTAGGGTTCCGGTGCCGGCTTCTCTTCGTTGTAAAGTTTCTAGCTCTTCAT
CTTCTTCTTCGCCTGAAACCCTTACCCTAACTCACTCTCCTTCAAAGACCTCAGCTTCTC
CTTCTTCACCGTCGTCGCCGTTACGGATTCTTAGGCTTCAGAAACCTCCACCGAGTAACC
TTATTAGAACTTCTAATACTGATTGTTCTACTTCTACGGTTTTGAAGAGGAAGAGACCGA
CTAGGTTGGATCTTCCGGTGGCTTCGATGAGTTTCGGGAATTTTCCGGTGACTCCTGCTG
GAGTAACGGATTTGGTTGAGGTTGAGGGTGATGGATATTCTGTTTGCTGTAAAAGGGGGA
GAAAAGGTGCAATGGAGGATCGTCACTCTGCCATGGTTAATCTTAAAGGAGATTCCAAAC
AGGGTGTTTTTGGTATATTTGATGGTCATGGAGGAGTAAAAGCTGCAGAGTTTTCAGCAG
AGAACTTGAATAAGAACATTATGAATGAACTAGGGAAGACAACAGATGACAAAATAGAAG
CGGCAGTGAAAAACGGTTATCTTAAAACAGATACTGAATTTCTCAGCCAAGAAGTTCGGG
GTGGATCATGCTGCGTGACAGCGTTAATCCAAAAGGGCAATCTAGTTGTATCTAATGCTG
GAGATTGTCGTGCTGTTGTGAGCAGAGGAGGGCTTGCTGAGGCATTGACCTCTGATCATA
GGCCTTCAAGGAAAGATGAGAAGGATAGAATTGAGGCATCGGGTGGGTACGTGGATTGTT
GTCATGGTGTTTGGAGAATTCAGGGATCTCTCGCTGTATCAAGGGGTATTGGGGATCAGT
ACCTTAAACAATGGGTAACAGCAGAACCTGAGACGAAGATTCTTGAACTTAATCCTGAAT
TGGAATTCTTAGTCCTAGCATCTGATGGCTTATGGGATACCGTTAGCAACCAGGAAGCAG
TAGATATTGCTCGGCCTTTGTGCACTGGCATCAGTACACAGCAGCCCTTGTCAGCGTGTA
GAAAGCTCATTGACCTCTCTGTTTCGCGAGGTTCACTTGATGATATAAGTGTGATGATCA
TTCAACTGGGACAATTCTGTTGACAGATCCCCAATGTAGGTTAGGAATTCTTTCTTACTA
ACTCGCAGACGAATTGCTAGCCAGAGATTTTTACAAGAATAACAGTTAGATCAGTTTACT
AGTATGAGGTTTTCAACTCTGTAAATCAAATTGTTATTGGACTTCAGATCAGGTGAAATG
ATGAGCAAAAATCCTGTTTTATCCATTTGTTCATTAGACAATGTTTACGATATTATTATC
AGCAATCGTTATTTAATTGTTAAACATCCTATGATTGTATTGAGACGGACATGTACAAGT
GTGAATTCTATTGCTAAAAACTTTATACTTGAAGTCGTGGTAGTTAAATAAAG