Microarray Probes on PGSC0003DMT400078033
Probe ID | Chip | Probe Sequence |
---|
CUST_22771_PI426222305 |
JHI_St_60k_v1 |
GAGACTATCAACTAAGAGAGTTGTGGATGTATACGGTAATACAACATTGAATGTCTTTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078033
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078033 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G07270.1 |
+2 |
3e-175 |
514 |
281/460 (61%) |
Cell division control, Cdc6 | chr1:2229757-2232897 REVERSE LENGTH=505 |
Transcript Sequence (2092 bp)
>PGSC0003DMT400078033 2092 pgsc_dm_v3.4
TATATATCCTATATAAATAGCAAATAATTATTTTTAATCTACAGAGACGTTCACTTCAGT
CGAACACTGCAAGCACTGTTCATCTCATCGGAAGTTCAAAATGCCGACAATCGTCGACCG
TCGTTCAACACGTGTCTCCGGTGGGAGTAAAGTCGCCGATCCAATCGCCATCAACGGTGA
GATTGACTCCACTCCTCAAAAACGCAAACTCAGATCCAGTTCCAGTTCCACTACTGAAGA
CAGTAGAGTAACTTCGGATTTAACTCCGTCGCCCTTGAAAAGCTCTCCGAGCAAATGGAA
ATCGCCGCGCCGATGTGTCAATGACAGCCCTAAGAGTACTCCAAATGCAAATCGAGGAGC
TAAAGCAGTAAATCTGAGCAAATCACCTGTGAAAAGGAGATTATCGGAAAGTTTTCTAGA
GAAGCCTATGTGGAATCCAAGAGATATGGAGCAGTTAAATGGAGTGAAAGAGGCATTGCA
TGTGTCTAGGGCTCCATCAAATCTGGTGTGTCGAGAAGTTGAGAACAATAGAATTCTGGA
GTTCTGTAAGCAAGCAGTGGAACAAGAGAAGGCTGGAAGTTTGTATATCTGCGGCTGCCC
AGGGACTGGAAAGTCTCTATCAATGGAGAAGGTTAACAAGGTCCTGGTTAATTGGGCAGA
AGAGTCTGGTTTTCAGGCTCCAGACACATTATCACTCAACTGCAGTTCTCTGTCAAACAC
ATCTGACATTTTTGGCAAGATACTTGACAAAATTAAACTACGGAGAAAGATAAATAGTTG
CAAATCACCATTGCAGTATCTTCAGAAAATGTTTTCTGAGAAGCAGCAGTCAGCAGTCAC
AAAGATGTTGTTAATAGTTGCTGATGAGTTGGATTACTTGATCACAAAAGACAGAGCTGT
GCTTCATGAGCTGTTCATGCTAACAACGCTCCCGTTCTCCAGATTTATTCTGATAGGAAT
TGCTAATGCAATAGACCTAGCAGATAAATTTCTTCCAAAACTACAATCCTTGAATTGCAA
GCCAGCAGTGGTAACATTTCGTGCCTATTCTAAGGACCAGATCATCTCCATTCTTCAGCA
AAGATTAAAGGCATTTCCTTACACAGTCTTCCAGCCTCAAGCATTGGAACTATGTGCACG
GAAAGTTGCTTCTGCATCTGGAGATATGAGGAAGGCTCTATGGATATGCAGGAGTGCAAT
TGAGATGTTAGAATCTGACATAAGAGATTCTATCAACAGCCTTGATTTACCATCATTACA
TGGAGGAGTTTCTGATCAACAGAGGGATTGTGCTTGTGATAAAGCACTTATACACGAGAG
CAATGTTGTTAGGGTTGATCATGTGGCTATTGCTTTATCAAAGGCATATAGATCGCCAGT
GGTGGATACTATACAATCACTTCCACAACATCAACAGATTATTCTTTGCTCTGCTGTCAA
GCTATTCAGGGGGAAGAAGAAGGATGCCACTATAGGCGAGCTGAACATCTCTTACCTTGA
TATCTGTAAATCAACTTTAATACCACCAGCAGGAATCATGGAGCTATCAAGCATGTGTAG
AGTGCTAGGAGACCAGGGGATCCTAAAACTGGGGAAGGCTAGGGAAGAAAAATTAAGTAG
AGTAACTCTAAAGGTAGATGAAGCAGACATCACCTTTGCATTGCAGGGAATACGCTTCTT
TCGAAATTGTCTTCAACAATCTTGATGATTGACTTGAACAATATTGTGTTTCTTTATTAT
TTATTCCGTTGCTCAAATAAATTGCCAGTTTATGGTCCAAACATGAAGAAATCAAACTTG
GTCAAAGTGGCTATATATGACTTACGGATGAATGGAACAGGAACATATGGGGTTCTCCAT
TAAATGTTGGAATTTCCATGTGGCTCCCTCCCTTATCATACTTTTAGTTCTCAAAGAGAA
AAATACAGTACATTATAGGAAGAGACTATCAACTAAGAGAGTTGTGGATGTATACGGTAA
TACAACATTGAATGTCTTTCAATTTCAAGAATTTCTGGAAACAAATTTTGACCTGTAAAC
TTTATCGTATTATTATCAGATGCTGATTCTCATCTTCAAGAATCAAATGGAA