Microarray Probes on PGSC0003DMT400078021
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22692_PI426222305 |
JHI_St_60k_v1 |
TGTTCATGTGGGCGTTCTCCTCGCTGCTAATGGCAGAGAGTATGTTCTTGGAAGAATATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078021
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078021 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G07350.1 |
+3 |
5e-38 |
145 |
83/109 (76%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2257732-2260101 REVERSE LENGTH=382 |
Transcript Sequence (1824 bp)
>PGSC0003DMT400078021 1824 pgsc_dm_v3.4
CGCAACCCATTCGAGAGCCTTCGCTAATTAGAGAGAGAAAGAGACGCATTTCGATACTAC
GCCATAATCTCTTCACGATGTCGTATTCCAGGAGGTCAAGGTAATGTTGGTCTTAATATG
GGTTTTGTATGGTCATTATTCCTTGTCATGTTCAAATATGACATTTATATTGCAGGTATA
CTCGTTCACCTTCATACGATCGATATAGCAAGTCTGTCTCGAGGTCCAGATATGTTTCAA
GGAGTCGGTCAAGGAGCTGTGATTCAAGTGATGTTGAGAACCCAGGGAACAATTTGTATG
TGACTGGTCTCTCAACCCGCGTTAAAGAGCGAGATGTTGAGAAGCATTTTTCTGCTGAGG
GAAAGGTTGAAGATGTTCGTCTTGTTTTTGACCCATGGACCCGCGAATCTCGTGGGTTTG
GTTTCGTGACGATGTCCAGCGTTGAGGAGGCTGATCGCTGCATCAAGTCTCTGAATCGCT
CAGTACTTGAAGGCAGAGTTATCACTGTGGAGAAGGCTAGGAGGAGAAGAGGTAGAACAC
CTACTCCAGGAAAATATTTGGGGCTTAGAACTGTTCGCGTTCGTCGTGAATCACGAAACT
ATCCTCATCATTCAAGGAGTCGCTCTCCTTGTTACTCATCTGAAAGCTACAGGAGCAGGA
GCAGGTCTTACTCTCCATATTACCGACAAGAGCATAGATCATACTCTTATTACAGAGGAC
GCCAGAGATCTCACTCATCATATTACAATCGACACCACTGCTACTCAGAATCACCTTATT
CTCCTTACTATAGTCGTGTCAGGTCTTACTCTCGATCTTTATCCCCATATAGTCGGCGTG
ATCGGTCCTACTCTCCAGATGACCGTTACTACAGAAGAAGCCGTTACCATGACTATTCTC
CCGACAATCATCGGCGTGATCGTTCCTATTCTCCAGATGACCGTTACTATAGAAGAAGCC
GCTACCGTGACTACTCTCCCGAAAGCCGTGATCTTTCGGACTCTCCAGATGTTCGTGACA
ACAGAATGAGCCGCTATCGCGATTACTCTCCGAACAGTTACTATTATCGAAGGAACCGAT
ATCGTTCCATTTCTCGGAGCATTTCACCTCGATATCGGAGAAGCTACTCATGCAGTGCAT
CACCTAGGTGGTCAAAGAGGAGCTATTCAAGAAGCGTTTCCAGGAGCAGCTGCTCTCGTA
GCAGTTACTCTCCTAATCCGAAGAAAAGCTCTAAGAAGAGTCGCAGTGTTAGTGCATCTT
CCAGATTTGTTTCAAGGTCTGTTACACCTAGGTCTTCGCCTTCATCATGAAAGGACTACA
CTACTAGGAAGGTCTAGTCTGTCACTCTCTGTTGCAAAGAGTTTAAAGTTGTACTAGATT
GGTCACTCAAGTAGAATTACTCAAGATAACAAATCTGCTTTCCAGCTTATGTGACTGGTG
GAAATGAGATCTAGCTGTACTATTGTGTTTGTAATTTAATGCAGAGGTAATACGGTGTAT
TGACCGAATATGGAAACGACACTAGCATATTAATGTGTACGAAGCCAGTACAGAAATCTC
TCAATTTCTTCATTGCTTTCTAGTGGCTTTTATATGTTGGGTGTGTATAACATAGTATTT
CATGGGTTATAACTTGTGAGTATTCCTGTAACTATATGCGGTGCATGACTATTGAAGTCT
TGAACTAGTAGTAATTCACACAGGTTTAAATGCTATAGCCTTGATGTAGTAGTTACATAG
CTGTTGGCCATGATTATATGTTCATGTGGGCGTTCTCCTCGCTGCTAATGGCAGAGAGTA
TGTTCTTGGAAGAATATACCAAGG
