Microarray Probes on PGSC0003DMT400078006
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22541_PI426222305 |
JHI_St_60k_v1 |
TCGGCTCTGTTTCTAGCCTAATGGCGTAATTGTACTTTCTTTGAAATTCCATGTTGAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078006
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078006 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G07400.1 |
+1 |
1e-68 |
212 |
121/157 (77%) |
HSP20-like chaperones superfamily protein | chr1:2275148-2275621 FORWARD LENGTH=157 |
Transcript Sequence (767 bp)
>PGSC0003DMT400078006 767 pgsc_dm_v3.4
AGAAGCTATAAATAACTAACCAGGTTCTCTTCCATCAACCATCAAAATTGAAAAAACAAG
CAAAAACACAAGTTTTTCAAAAGCTCACTGAAAATGTCACTGATCCCAAGAATCTTCGGC
GATCGAAGAAGCAGCAGCATGTTTGATCCATTCTCAATGGACGTGTTCGATTCGTTCAAG
GAACTAGGCTTCCCAGTTTCCAATTCAGGAGAGACCTCTGCATTTGCGAACACTCGAGTC
GACTGGAAGGAAACTCCAGAAGCTCATGTGTTCAAGGCCGATCTTCCAGGGCTTAAAAAG
GAGGAAGTGAAAGTGGAGATCGAAGAAGATAGGGTTCTTCAAATTAGCGGAGAGAGGAAT
GTGGAGAAAGAAGATAAGAATGATAAGTGGCATCGCGTGGAACGCAGCAGTGGGAAATTC
ATGAGAAGATTTAGACTTCCGGAGAATGCGAAGATGGATCAAGTTAAGGCTTCGATGGAG
AATGGAGTGCTTACTGTTACTGTTCCAAAGGAACAAGTGAAGAAGCCTGATGTCAAGTCC
ATTGAGATCTCTGGTTAAAAGTCCATTTGTGAATTAAGTAGTAGTATATGATATATGGGC
AAATAAAGAACTGATTCCGTTGTGTCTGTTGAAGATTTGAAGTTACTCTGTTTTTCTATT
GAAGTGTTGAGTCGGCTCTGTTTCTAGCCTAATGGCGTAATTGTACTTTCTTTGAAATTC
CATGTTGAATATGAAATATTAGTCCTTTGATTCTGTTCCAATTCCTC
